Pairwise Alignments

Query, 410 a.a., response regulator receiver protein (RefSeq) from Shewanella sp. ANA-3

Subject, 619 a.a., [FeFe] hydrogenase, group A from Rhodopseudomonas palustris CGA009

 Score =  265 bits (678), Expect = 2e-75
 Identities = 163/398 (40%), Positives = 221/398 (55%), Gaps = 55/398 (13%)

Query: 21  KCKGCDACKQFCPTH-----------------AIHGASGAVHSIDEDKCLSCGQCLINCP 63
           +C  C  C   C  H                 A+  A G  +S+    C+SCGQC++ CP
Sbjct: 169 RCVRCQRCVAICRYHQKIDALAIEGSGLERMVALRDADGYPNSV----CVSCGQCVLVCP 224

Query: 64  FSAI---EETHSALETVIKKLADKNTTVVGIIAPAVRVAIGEEFGLGTGELVTGKLYGAM 120
             A+   +ET  AL+ +     D N   V   APAVRVA GEEFGL  G  V G++  A 
Sbjct: 225 TGALGERDETDRALDYI----CDPNVVTVVQFAPAVRVAFGEEFGLPAGTNVEGQIIAAC 280

Query: 121 NQAGFKI-FDCNFAADLTIMEEGSEFIHRLHANVKGEENAGALPQFTSCCPGWVRYLETR 179
            + G  +  D NFAAD+ IMEEG+E + RL          G  P FTSCCP W+ + E  
Sbjct: 281 RKLGVDVVLDTNFAADVVIMEEGAELLARL--------KQGRRPTFTSCCPAWINFAEIH 332

Query: 180 YPALLPNLSTAKSPQQMAGTVAKTYGAKVYQMQPENIFTVSVMPCTSKKLEASRPEFNSA 239
           YP +LP LS+ KSPQQ+  T+AK+Y      +  E I  +S+MPC +KK EA RP+    
Sbjct: 333 YPDVLPLLSSTKSPQQVLSTIAKSYLPAQLGVPAERIRVISIMPCIAKKDEAVRPQ---- 388

Query: 240 WQYHQEQGANTPSYQDIDAVLTTREMAQLLKMLDIDLANTPEYQGDSMF-SEYTGAGTIF 298
              H  Q        + D VLTTRE A+LL+   IDL + P  Q D  F S Y+GAG IF
Sbjct: 389 -MVHDGQ-------PETDLVLTTREFARLLRREGIDLKDLPSSQFDRPFLSAYSGAGAIF 440

Query: 299 GTTGGVMEAALRTAHKVLTGTEMAKLEFEPVRGLKGVKSASVSLFDTQLNQNVTVNVAVV 358
           GTTGGVMEAA+RT + ++ G E+ ++E   +RG +G++ A+V L    + +   V VA+V
Sbjct: 441 GTTGGVMEAAVRTIYALVNGRELERIELTQLRGFEGLREATVDL-GAPVGE---VKVAMV 496

Query: 359 HDMGNNIEPVLRDVMAGTSPYHFIEVMNCAGGCVNGGG 396
           H +G+    ++  V++G + Y FIEVM C GGCV+GGG
Sbjct: 497 HGLGDT-RKLVESVLSGEANYDFIEVMACPGGCVDGGG 533