Pairwise Alignments

Query, 410 a.a., response regulator receiver protein (RefSeq) from Shewanella sp. ANA-3

Subject, 482 a.a., putative hydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  101 bits (252), Expect = 4e-26
 Identities = 93/369 (25%), Positives = 141/369 (38%), Gaps = 85/369 (23%)

Query: 28  CKQFCPTHAIHGASGAVHSIDEDKCLSCGQCLINCPFSAIEETHSALETVIKKLADKNTT 87
           C++ CP  AI      V  IDE KC+ CG+C+  CPF AI E     + +  +   K   
Sbjct: 167 CEESCPVKAISKDEHGVEHIDESKCIYCGKCMNACPFGAIFEISQTFDVL--QHIKKGEK 224

Query: 88  VVGIIAPAVRVAIGEEFGLGTGELVTGKLYGAMNQAGFK-IFDCNFAADLTIMEEGSEFI 146
           +V IIAP++         LG  +    ++YGA  + GF  I +    A +T   E  E +
Sbjct: 225 LVAIIAPSI---------LGQFKTSIEQVYGAFKEIGFTDIIEVAEGAMMTTSNEAHELL 275

Query: 147 HRLHANVKGEENAGALPQFTSCCPGWVRYLETRYPALLPNLSTAKSPQQMAGTVAKTYGA 206
            +L    K           TSCCP ++  +E     + P +ST  SP   A  +AK    
Sbjct: 276 EKLEEGQKF--------MTTSCCPSYIELVEKHMTEMKPYVSTTGSPMYYAARIAK---- 323

Query: 207 KVYQMQPENIFTVSVMPCTSKKLEASRPEFNSAWQYHQEQGANTPSYQDIDAVLTTREMA 266
              +  P+    V V PC +K+ E  R +                    +D +LT  E+ 
Sbjct: 324 ---EKHPDAKI-VFVGPCVAKRKEVRRDDA-------------------VDYILTFEEVG 360

Query: 267 QLLKMLDIDLANTPEYQGDSMFSEYTGAGTIFGTTGGVMEAALRTAHKVLTGTEMAKLEF 326
            +L  +DI L     +                     ++  ++R AH            F
Sbjct: 361 SILDGMDIQLEQVNSFS--------------------ILHTSVREAHG-----------F 389

Query: 327 EPVRGLKGVKSASVSLFDTQLNQNVTVNVAVVHDMGNNIEPVLRD-VMAGTSPYHFIEVM 385
               G+ G   A +        +   +N   V D+      +LR     G +   FIEVM
Sbjct: 390 AQAGGVMGAVKAYLK------EEADKINAIQVSDINKKNIALLRACAKTGKAAGQFIEVM 443

Query: 386 NCAGGCVNG 394
            C GGC+ G
Sbjct: 444 ACEGGCITG 452