Pairwise Alignments

Query, 246 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) from Shewanella sp. ANA-3

Subject, 252 a.a., 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  283 bits (725), Expect = 2e-81
 Identities = 142/239 (59%), Positives = 179/239 (74%), Gaps = 2/239 (0%)

Query: 7   IFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSRKVLDDKAES 66
           I+G+HAVEALL+H P+R+ ++WL +GR + R+  L+  A     +I    R+ +D   E 
Sbjct: 6   IYGVHAVEALLRHHPKRVKQVWLAEGRSEPRVQALVELATQNKVAIGQAERREMDVWVEG 65

Query: 67  AQHQGIVARVKAAKILGEHDLDELLGKTD-LPFLLILDGVTDPHNLGACLRNADAAGVQG 125
             HQG+VA V  +++ GE  LDELL +T+  P LL+LDGVTDPHNLGACLR+ADAAG   
Sbjct: 66  V-HQGVVADVSPSQVWGEAMLDELLDRTEGAPLLLVLDGVTDPHNLGACLRSADAAGALA 124

Query: 126 IIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGEADCELY 185
           +IVPKD S  LT  V KVACGAAE +PL  VTNLART+  LQ++G+W+VGTAGEA+  +Y
Sbjct: 125 VIVPKDKSATLTPAVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEVSIY 184

Query: 186 QADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMAGSVSSLNVSVATGICLFEAVRQR 244
             DL GP  + MGAEGKG+RRL+RE CD LV +PMAGSVSSLNVSVATG+CLFEA+RQR
Sbjct: 185 DQDLTGPTILIMGAEGKGMRRLTREHCDYLVKLPMAGSVSSLNVSVATGVCLFEALRQR 243