Pairwise Alignments

Query, 246 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) from Shewanella sp. ANA-3

Subject, 247 a.a., tRNA/rRNA methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  132 bits (333), Expect = 5e-36
 Identities = 83/247 (33%), Positives = 129/247 (52%), Gaps = 7/247 (2%)

Query: 3   KQDIIFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSRKVLDD 62
           K ++IFG+ AV   ++   E I ++ + +  + +    L    K     +Q    + ++ 
Sbjct: 4   KSEMIFGVRAVIEAIQAGKE-IDKILVKKDIQSDLSKELFAALKGLLIPVQRVPVERIN- 61

Query: 63  KAESAQHQGIVARVKAAKILGEHDLDELL---GKTDLPFLLILDGVTDPHNLGACLRNAD 119
           +     HQG+VA + +       DL   L   GK   PF ++LDG+TD  N GA  R  +
Sbjct: 62  RITRKNHQGVVAFISSVTYQKTEDLVPFLFEQGKN--PFFVMLDGITDVRNFGAIARTCE 119

Query: 120 AAGVQGIIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGE 179
            A V  +I+P   SV + A   K + GA  T+P+ +  NL  T+++L++ G  IV    +
Sbjct: 120 CAAVDAVIIPARGSVSVNADAMKTSAGALHTLPVCREQNLRATLQYLKDSGFRIVAATEK 179

Query: 180 ADCELYQADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMAGSVSSLNVSVATGICLFE 239
            D +  +AD  GP+ I MGAE  G+       CD  V IPM G++ SLNVSVA GI ++E
Sbjct: 180 GDYDYTKADYTGPMCIIMGAEDTGVSYDHLALCDEWVKIPMLGTIESLNVSVAAGILIYE 239

Query: 240 AVRQRRS 246
           AV+QR +
Sbjct: 240 AVKQRNN 246