Pairwise Alignments

Query, 95 a.a., sigma 54 modulation protein / SSU ribosomal protein S30P (RefSeq) from Shewanella sp. ANA-3

Subject, 118 a.a., ribosomal subunit interface protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 65.9 bits (159), Expect = 1e-16
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 1  MQINLSGHHIEITESLRAYVEEKFSKLERHFEQINNVHVVLNVEKMQQIAEARINLTGGE 60
          M+INLSGHH+++T+S++ +V EKFSK+  HF  +  + +++  E  +   E R N  G  
Sbjct: 1  MKINLSGHHVDVTDSVKEHVNEKFSKIATHFPTLIGLDIIIAKEHGEFQVEIRTNYEGSR 60

Query: 61 VFATSEHADMYAAIDVLIDKLDRQVIKHKE 90
          + A+     MY AI     KLD   +KH++
Sbjct: 61 ISASGTDEVMYPAIANAAKKLD-AALKHRK 89