Pairwise Alignments

Query, 473 a.a., cytochrome c552 (RefSeq) from Shewanella sp. ANA-3

Subject, 524 a.a., Nitrite reductase (cytochrome; ammonia-forming) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  201 bits (511), Expect = 5e-56
 Identities = 159/512 (31%), Positives = 228/512 (44%), Gaps = 72/512 (14%)

Query: 15  SFALSALVAASFMAAGAMASDKT-----EPRNEVYKDKFANQYNSWHDTAKSEEIT---- 65
           + AL+AL   S  +     + KT     E +N  +K +F   Y ++    +S+ +T    
Sbjct: 12  AMALAALAGCSEPSEPMTPTYKTKLSAEEMKNSAFKAEFPLHYETYLRNNESQIMTEYGG 71

Query: 66  ----------DALA-----GDPSLVILWAGYGFAKDYNAPRGHMYAVTDVRNTLRTGAPA 110
                     D L        P L  LW GY F+ +Y A RGH YAV D+ +  R     
Sbjct: 72  SVPYNKHDNVDPLPEGYKHAQPYLKNLWLGYPFSYEYRAARGHTYAVKDILHIDRLNN-- 129

Query: 111 NAEDGPMPMACWSCKSPDVPRLIEEQGEEGYFKGKWAKGGPEVV-------NTIGCSDCH 163
            +E   +P  CW+CK+P +   ++E G++      WAK   E         +TIGC++CH
Sbjct: 130 YSEKAGLPSTCWNCKTPKMMEWVKENGDDF-----WAKDFHEFRQKLDVDDHTIGCANCH 184

Query: 164 EKGTPKLRISRPFAERAMETIGTPFDKASKKDKQSMVCGQCHVEYYFEKKDDRKGFVK-- 221
           E  T +LR+     +  +++    F    + +K+++VCGQCHVEYYF+ K+   G  K  
Sbjct: 185 EPQTMELRLYSEPLKDYLKSQNKEFKNLPRNEKRALVCGQCHVEYYFQDKEF--GAAKKP 242

Query: 222 -FPWDSGTTVEQMEAYYDAI----------EFSDWTHALSKTPMLKAQHPGYETWKLGVH 270
            FPW +G   E M  YY              F DW H +SKTPMLKAQHP YETW  GVH
Sbjct: 243 VFPWANGFDPEDMFEYYKTHGNTTTKGFEGNFVDWVHPVSKTPMLKAQHPEYETWINGVH 302

Query: 271 GKNDVSCVDCHMPKVTNDKGRKYTDHKVGNPFDRFD-ETCATCHS-QSKEFLEGITKERY 328
           G   V+C DCHM  V  D  +K + H   +P    D   C  CH+ ++ ++L        
Sbjct: 303 GSAGVTCADCHMSYVRLDGKKKMSTHHWTSPLKDPDLRACRQCHTDKTPDYLRQRVLFTQ 362

Query: 329 AKVKELKARAEGQLVKAHFEAAKAWE-VGATEAEMKPILTDIRH----AQWRWDFAIASH 383
            KV E    A+   VKAH     A E  G   A+   ++ + R      Q+ WD   A +
Sbjct: 363 NKVWEQLMVAQDISVKAHEAIRMAAEYTGPKPADYDDLMIEARQMCRKGQFFWDLVSAEN 422

Query: 384 GVAAHAPEEALRILGTA---VDKAADARVKLAQLLAKKGVTDAV--AIPDISTKAKAQAA 438
            V  H P +AL  L  +     KA D  ++ A     K +   +   +P I    K    
Sbjct: 423 SVGFHNPTKALNTLAQSQQYSQKAVDVAIRAAAFTTAKDLDGDIKKIVPPI---LKHSRE 479

Query: 439 LGMDMDKMNAEKEAFKKDVLPK----WDEEAK 466
           L MD   M   K      + PK    WD + +
Sbjct: 480 LQMDPAHMATHKWFKYIPLTPKAPRVWDGQTR 511