Pairwise Alignments

Query, 473 a.a., cytochrome c552 (RefSeq) from Shewanella sp. ANA-3

Subject, 529 a.a., Nitrite reductase (cytochrome; ammonia-forming) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  212 bits (539), Expect = 3e-59
 Identities = 142/423 (33%), Positives = 201/423 (47%), Gaps = 62/423 (14%)

Query: 38  EPRNEVYKDKFANQYNSWHDTAKSEEITDALAG-------------------DPSLVILW 78
           E R+  +K +F  QY S+    +S  +T+                        P L  LW
Sbjct: 52  ETRSSAFKAEFPQQYASYQRNDESTVMTEFNGSVPFNKNDNVNPLPEGYKHAQPYLKNLW 111

Query: 79  AGYGFAKDYNAPRGHMYAVTDVRNTLRTGAPANAEDGPMPMACWSCKSPDVPRLIEEQGE 138
            GY F+ +Y   RGH  A+ D  +  R      AE G +P  CW+CK+P +   +++ G+
Sbjct: 112 LGYPFSYEYRNARGHTKALEDFLHIDRINT--YAEKGGLPATCWNCKTPKMMGWVKQYGD 169

Query: 139 EGYFKGKWAKGGPEVVN-------TIGCSDCHEKGTPKLRISRPFAERAMETIGTPFDKA 191
           +      WAK   E  +       TIGC++CH+  T +LR+     +  ++  G  +DK 
Sbjct: 170 DF-----WAKDINEFRDKIDMKDETIGCANCHDPQTMELRLYSEPLKDQLKAQGKDWDKL 224

Query: 192 SKKDKQSMVCGQCHVEYYFEKKDDRKGFVK---FPWDSGTTVEQMEAYYDAI-------- 240
           S+ DK+S+VCGQCHVEYYF+ K+  KG  K   FPW  G   +QM  YY           
Sbjct: 225 SRNDKRSLVCGQCHVEYYFQDKE--KGVAKKPVFPWADGYDPQQMYTYYKTAGNSQMKGF 282

Query: 241 --EFSDWTHALSKTPMLKAQHPGYETWKLGVHGKNDVSCVDCHMPKVTNDKGRKYTDHKV 298
              F DW H +SKTPM+KAQHP YE W+ GVHG   VSC DCHM     D  +K + H  
Sbjct: 283 EGNFVDWVHPVSKTPMIKAQHPEYEMWQNGVHGAAGVSCADCHMGYTRTDDKKKISGHWW 342

Query: 299 GNPFDRFD-ETCATCHS-QSKEFLEGITKERYAKVKELKARAEGQLVKAHFEAAKAWEV- 355
            +P    D   C  CHS +S ++L         K  +   +A+   VKAH     A E  
Sbjct: 343 TSPLKDPDMRACRQCHSDKSPDYLRSRVLFSQQKTFDQLLKAQDLSVKAHEAVRLASEFQ 402

Query: 356 GATEAEMKPILTD----IRHAQWRWDFAIASHGVAAHAPEEALRILGT-------AVDKA 404
           GA  A  + ++      +R  Q+ WD+  A + V  H P +AL  L +       AVD A
Sbjct: 403 GAKPANYEELMIQARDMVRKGQFFWDYVSAENSVGFHNPAKALDTLASSQQYSQQAVDLA 462

Query: 405 ADA 407
           ++A
Sbjct: 463 SEA 465