Pairwise Alignments

Query, 473 a.a., cytochrome c552 (RefSeq) from Shewanella sp. ANA-3

Subject, 493 a.a., cytochrome C552 precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  465 bits (1197), Expect = e-135
 Identities = 229/462 (49%), Positives = 300/462 (64%), Gaps = 17/462 (3%)

Query: 18  LSALVAASFMAAGAMASDKT-----EPRNEVYKDKFANQYNSWHDTAKSE--------EI 64
           +SAL+      A    + KT     E RNE++KD F  +Y +W +TAK++          
Sbjct: 28  VSALMERRAEVASIFNNRKTVIKGIEARNELFKDDFPREYQTWTETAKTDFESEFNGNVA 87

Query: 65  TDALAGDPSLVILWAGYGFAKDYNAPRGHMYAVTDVRNTLRTGAPANAEDGPMPMACWSC 124
            DAL   P +VILWAGY F+KDY+ PRGHM+A+ D+  +LRTG+PA   DGP P  CW+C
Sbjct: 88  VDALEKRPEMVILWAGYAFSKDYSTPRGHMHAIEDITASLRTGSPAGPHDGPQPSTCWTC 147

Query: 125 KSPDVPRLIEEQGEEGYFKGKWAKGGPEVVNTIGCSDCHEKGTPKLRISRPFAERAMETI 184
           KSPDVPR++E  G + ++  KWA  G E+VN IGCSDCH+  T  L ISRP    A +  
Sbjct: 148 KSPDVPRMMEALGVDSFYNNKWAAFGDEIVNPIGCSDCHDPETMNLHISRPALIEAFQRQ 207

Query: 185 GTPFDKASKKDKQSMVCGQCHVEYYFEKKDDRKGFVKFPWDSGTTVEQMEAYYDAIEFSD 244
           G    KA+ ++ +S+VC QCHVEYYF  K D K ++ FPWD G TVE MEAYYD   F D
Sbjct: 208 GKDITKATPQEMRSLVCAQCHVEYYF--KGDGK-YLTFPWDKGFTVEDMEAYYDEAGFYD 264

Query: 245 WTHALSKTPMLKAQHPGYETWKLGVHGKNDVSCVDCHMPKVTNDKGRKYTDHKVGNPFDR 304
           + H LS+TP+LKAQHP YE  ++G+HG+  VSC DCHMP   ++ G K++DH + +P   
Sbjct: 265 YIHKLSRTPILKAQHPDYEIAQMGIHGQRGVSCADCHMP-YKSEGGVKFSDHHIQSPLAM 323

Query: 305 FDETCATCHSQSKEFLEGITKERYAKVKELKARAEGQLVKAHFEAAKAWEVGATEAEMKP 364
            D TC TCH +S+E L     ER  K  E++ R E +L KAH EA  AW+ GATE +MK 
Sbjct: 324 IDRTCQTCHRESEETLRNNVYERQRKANEIRNRLEQELAKAHIEAKFAWDKGATEDQMKD 383

Query: 365 ILTDIRHAQWRWDFAIASHGVAAHAPEEALRILGTAVDKAADARVKLAQLLAKKGVTDAV 424
           +L  IR AQWRWDF +ASHG + HAP+E  RIL   +D+A  AR+ ++++LAK G T+ V
Sbjct: 384 VLALIRQAQWRWDFGVASHGGSFHAPQEIQRILSHGLDRAMQARLAVSKVLAKHGYTEDV 443

Query: 425 AIPDISTKAKAQAALGMDMDKMNAEKEAFKKDVLPKWDEEAK 466
            +PDISTKAKAQ  +G+DMD   A KE F K  +P W E+AK
Sbjct: 444 PMPDISTKAKAQEYIGLDMDAERAAKEKFLKTTVPAWLEKAK 485