Pairwise Alignments

Query, 432 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Shewanella sp. ANA-3

Subject, 438 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  405 bits (1040), Expect = e-117
 Identities = 199/425 (46%), Positives = 287/425 (67%), Gaps = 2/425 (0%)

Query: 7   RKDLAESETKRREAEA-VVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEIVGKHH 65
           +K  A+SE ++   ++ +V ++K ++A IEF P G ILDAN LFL A+GY+ +E++G+HH
Sbjct: 11  KKAAAQSEVEQHNHDSDIVSALKRNLAYIEFDPQGKILDANALFLSAMGYTKEEVIGQHH 70

Query: 66  KLFCAEYYVNTSEYQQFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIK-LDGKITKI 124
           K+FC    VN+ EY QFW+ L QGQA+   F R+ K+G  IW+ ATY P++   G + K+
Sbjct: 71  KIFCDPETVNSLEYAQFWKSLAQGQAQRKMFHRLKKDGSSIWIEATYMPVRNRAGDVYKV 130

Query: 125 MKTAAVITEDKYQLDAQAALFSALQKSQAIIEFSPEGNILNANANFLRTMGYSKEQLQGK 184
           +K A  +T+ K   D QAA+F +L +S A+I+F+P+G I  AN NFL+  GY  E++ GK
Sbjct: 131 IKVAHDVTKAKITADKQAAVFHSLDRSSAMIQFNPDGTIKEANENFLKATGYRLEEIVGK 190

Query: 185 HHRLFCFDNFYQDNPHFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMDDHGKVVKV 244
           HHR+FC D FY++NP+FW +L RG++K GLF R+  +G  +WLEA YNP+ +D G V +V
Sbjct: 191 HHRMFCDDRFYKENPNFWRELARGEFKSGLFHRRTRHGQDLWLEATYNPIFNDAGVVTQV 250

Query: 245 IKFASDITQRIIKSHAIRDAANIAHATSQSTVEQANRGVQLLDATVNTSNAIAAQTHKTT 304
           +KFASD+T +++K+HA ++A+ +A  TS  TV  A  G +++DA    ++ I        
Sbjct: 251 VKFASDVTDQVLKAHATKEASQMAQQTSAETVRVAESGREMIDAAATIASGITESIAGAN 310

Query: 305 ESMLKLNEQSQSIQAIVATISAIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAA 364
             M  L+ QSQ I  IV TI+ IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA+
Sbjct: 311 ALMTDLSSQSQRITQIVTTINKIAEQTNLLALNAAIEAARAGEYGRGFAVVADEVRSLAS 370

Query: 365 RTSKSTGEIAAVVDKNSQLTASATSMMNEVERIAEEGKQQLAEVTAVMGDIRTGAENVAE 424
            TS++T EI  +V +NSQLT  +   M +++    E    L +  +++  I+  AENV +
Sbjct: 371 NTSQATSEIDNIVKRNSQLTEQSGQTMEQIQAKVTEFNHMLQQTQSLIEQIQHAAENVQK 430

Query: 425 TVSQL 429
           TVS +
Sbjct: 431 TVSNI 435