Pairwise Alignments

Query, 432 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Shewanella sp. ANA-3

Subject, 593 a.a., chemoreceptor methyl-accepting chemotaxis protein from Sinorhizobium meliloti 1021

 Score =  224 bits (571), Expect = 6e-63
 Identities = 132/415 (31%), Positives = 221/415 (53%), Gaps = 30/415 (7%)

Query: 13  SETKRREAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEIVGKHHKLFCAEY 72
           S T+ R+A  ++D++  S A I+F   G +LDAN  F KA+GYSL EIVG+HH++FCA  
Sbjct: 3   SFTRSRDARQIIDALSKSQAIIQFDLAGNVLDANENFCKALGYSLQEIVGQHHRIFCAPE 62

Query: 73  YVNTSEYQQFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIKLDGKITKIMKTAAVIT 132
           +V T EY++FW  L +G+     + R+ K G+EIW++A+Y P+  +GK  K++K A  IT
Sbjct: 63  FVATEEYREFWARLGRGELDSNSYRRLAKGGREIWIQASYNPVFRNGKPCKVVKFATDIT 122

Query: 133 EDKYQLDAQAALFSALQKSQAIIEFSPEGNILNANANFLRTMGYSKEQLQGKHHRLFCFD 192
             K +    A    A+ +SQA+IEFSP G ++ AN NF  T+GY   ++QG+HH +FC  
Sbjct: 123 AAKMKATEDAGKLDAISRSQAMIEFSPAGEVMTANENFCNTLGYQLSEIQGRHHSMFCEP 182

Query: 193 NF--YQDNPHFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMDDHGKVVKVIKFASD 250
            +    +   FW  L +G++    F R    G  +W++A YNP+ D +G+V KV+KFA+D
Sbjct: 183 GYTGTAEYADFWRRLAQGEFIANEFVRYGKGGKEVWIQAAYNPIRDPNGRVYKVVKFATD 242

Query: 251 ITQRIIKSHAIRDAANIAHATSQSTVEQANRGVQLLDATVNTSNAIAAQTHKTTESMLKL 310
           +T+R+    AI        A ++  + Q+      +D     S  +  +     E++++L
Sbjct: 243 VTERMA---AINSLGAGLRALAEGDLAQS------IDTPFVPSMEMVRKDF--NEALVRL 291

Query: 311 NEQSQSIQAIVATISAIADQTNLLALNAAIEAARAGEQGRGF---AVVADEVRQLAARTS 367
               +++Q +    SAIA     +   A   + R  +Q       A   DE+    A +S
Sbjct: 292 ---CRAMQTVGENASAIAGGAREIRSAADALSKRTEQQAASVEETAAALDEITTTVADSS 348

Query: 368 KSTGEIAAVV-------DKNSQLTASATSMMNEVERIAEEGKQQLAEVTAVMGDI 415
           +   E   +V       +++  +  SA   M ++    E+  ++++ +  V+ DI
Sbjct: 349 RRAEEAGNLVAKTKDGAERSGLVVKSAIGAMGQI----EQSSREISNIIGVIDDI 399



 Score =  147 bits (372), Expect = 7e-40
 Identities = 117/428 (27%), Positives = 195/428 (45%), Gaps = 58/428 (13%)

Query: 9   DLAESETKRREAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEIVGKHHKLF 68
           D+  ++ K  E    +D+I  S A IEF+P G ++ AN  F   +GY L EI G+HH +F
Sbjct: 120 DITAAKMKATEDAGKLDAISRSQAMIEFSPAGEVMTANENFCNTLGYQLSEIQGRHHSMF 179

Query: 69  CAEYYVNTSEYQQFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIK-LDGKITKIMKT 127
           C   Y  T+EY  FWR L QG+    +F R  K G+E+W++A Y PI+  +G++ K++K 
Sbjct: 180 CEPGYTGTAEYADFWRRLAQGEFIANEFVRYGKGGKEVWIQAAYNPIRDPNGRVYKVVKF 239

Query: 128 AAVITEDKYQLDAQAALFSALQKSQAIIEFSPEGNILNA-NANFLRTMGYSKEQLQGKHH 186
           A  +TE    +++  A   AL           EG++  + +  F+ +M            
Sbjct: 240 ATDVTERMAAINSLGAGLRAL----------AEGDLAQSIDTPFVPSM------------ 277

Query: 187 RLFCFDNFYQDNPHFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMDDHGKVVKVIK 246
                            ++ R  + + L +   A      ++ V        G   ++  
Sbjct: 278 -----------------EMVRKDFNEALVRLCRA------MQTVGENASAIAGGAREIRS 314

Query: 247 FASDITQRIIKSHAIRDAANIAHATSQSTVEQANRGVQLLDATVNTSNAIAAQTHKTTES 306
            A  +++R  +  A  +    A     +TV  ++R  +     V  +   A ++    +S
Sbjct: 315 AADALSKRTEQQAASVEETAAALDEITTTVADSSRRAEEAGNLVAKTKDGAERSGLVVKS 374

Query: 307 MLKLNEQSQSIQAIVATISAIAD----QTNLLALNAAIEAARAGEQGRGFAVVADEVRQL 362
            +    Q +     ++ I  + D    QTNLLALNA +EAARAGE G+GFAVVA EVR+L
Sbjct: 375 AIGAMGQIEQSSREISNIIGVIDDIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVREL 434

Query: 363 AARTSKSTGEIAAVVDKNSQLTASATSMMNEVERIAEEGKQQLAEVTAVMGDIRTGAENV 422
           A R++ +  +I  ++      TAS   + N V  + + G   L  + A + +I      +
Sbjct: 435 AQRSASAAKDIKTLI------TASGEHVRNGVSLVGQTG-TALETILAQVQEINHNVSAI 487

Query: 423 AETVSQLS 430
            E   + S
Sbjct: 488 VEAAREQS 495