Pairwise Alignments

Query, 299 a.a., tyrosine recombinase XerC (RefSeq) from Shewanella sp. ANA-3

Subject, 310 a.a., site-specific tyrosine recombinase XerC from Marinobacter adhaerens HP15

 Score =  277 bits (708), Expect = 3e-79
 Identities = 147/292 (50%), Positives = 205/292 (70%), Gaps = 3/292 (1%)

Query: 9   LQQFETYMQSERQLSAHTVRNYMYELQRGSELLPEG--VDLLNVGREHWQQVLAKLHRKG 66
           L +F  ++ SE++ S  T  +Y  +L R ++ L     V    V     ++ +A L R+G
Sbjct: 9   LAEFIRHLASEKRHSPRTCDSYHRDLLRLADWLGRSGFVAWQRVTNHDLRRYVATLSREG 68

Query: 67  LSPRSLSLWLSAIKQWGEFLLRSGVIELNPAKGLSAPKQAKPLPKNIDVDSISHLLAIEG 126
           LS RS++  LSA +++ +FLLR  +   NPA  + APK  + LP+  DVD ++HLL  + 
Sbjct: 69  LSGRSIARHLSATRRFYQFLLREKLASDNPALDIRAPKSGRRLPRVADVDQLNHLLDGQP 128

Query: 127 NDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQHEVRVLGKGNKERIVPVGRYAIE 186
           +DPL +RD  + EL YSSGLRLAELA+LDL +V     EVRV+GKG KER++PVGR AI 
Sbjct: 129 DDPLEVRDLCMFELMYSSGLRLAELASLDLDTVDVRSGEVRVMGKGGKERLLPVGRKAIA 188

Query: 187 AISAWLKCRKQISCE-DNALFVTEKGKRLSHRSIQARMSKWGQEQALSMRVHPHKLRHSF 245
           AI AW+  R  ++ + + ALFV+++G+RLSHRSIQAR+S+WG  +    ++HPH LRHSF
Sbjct: 189 AIQAWVPYRAALANDGEAALFVSQRGERLSHRSIQARLSRWGISRGADQKLHPHLLRHSF 248

Query: 246 ATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRAKKQQ 297
           A+HMLESS DLRAVQELLGH +++TTQ+YT LDFQHLA+VYD +HPRA++ +
Sbjct: 249 ASHMLESSGDLRAVQELLGHADIATTQVYTHLDFQHLARVYDQSHPRARRDR 300