Pairwise Alignments

Query, 299 a.a., tyrosine recombinase XerC (RefSeq) from Shewanella sp. ANA-3

Subject, 319 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  179 bits (454), Expect = 7e-50
 Identities = 102/290 (35%), Positives = 175/290 (60%), Gaps = 6/290 (2%)

Query: 9   LQQFETYMQSERQLSAHTVRNYMYELQRGSELLP-EGVDLLNVGREHWQQVLAKLHRKGL 67
           +++++ Y++ E+ LS +T+  Y+ +L +    L  EG+D+L V     Q+  A LH  G+
Sbjct: 17  IRKYQQYLKLEKSLSPNTLDAYLTDLDKLMSFLTLEGIDVLEVCLSDLQRFAAGLHDIGI 76

Query: 68  SPRSLSLWLSAIKQWGEFLLRSGVIELNPAKGLSAPKQAKPLPKNIDVDSISHLLA-IEG 126
            PRS +  LS IK +  FL+ +  +E +P++ L  PK    LP+ + V+ I ++++ ++ 
Sbjct: 77  HPRSQARILSGIKSFFRFLIMADYLEADPSELLEGPKIGLKLPEVLTVEEIDNIISSVDR 136

Query: 127 NDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQHEVRVLGKGNKERIVPVGRYAIE 186
           +     R++AI+E  YS GLR++EL +L LS + +D+  ++V GKG+K+R+VP+   AI 
Sbjct: 137 SKAEGQRNRAILETLYSCGLRVSELVSLKLSDLYFDEGFIKVEGKGSKQRLVPISPRAIN 196

Query: 187 AISAWLKCRKQISCE---DNALFVTEK-GKRLSHRSIQARMSKWGQEQALSMRVHPHKLR 242
            I  +   R +I  +   ++ +FV+++ GK LS   I   + +  Q   ++  + PH  R
Sbjct: 197 EIKLYFLDRNRIEVKKDYEDFVFVSQRRGKSLSRIMIFHMIKELAQNAGITKNISPHTFR 256

Query: 243 HSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPR 292
           HSFATH+LE  A+LRA+Q +LGHE+++TT+IYT +D   L       HPR
Sbjct: 257 HSFATHLLEGGANLRAIQCMLGHESIATTEIYTHIDRNMLRSEIIEHHPR 306