Pairwise Alignments

Query, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella sp. ANA-3

Subject, 422 a.a., diaminopimelate DAP decarboxylase from Sinorhizobium meliloti 1021

 Score =  417 bits (1073), Expect = e-121
 Identities = 219/411 (53%), Positives = 273/411 (66%), Gaps = 5/411 (1%)

Query: 1   MDHFLYQDNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVK 60
           M+HF Y+D  LYAE   + ++A+  GTP Y YS ATLERH+  F+ A AD   +VCYA+K
Sbjct: 1   MNHFQYRDGILYAEDVPLTEIARAVGTPFYCYSTATLERHYKVFSQAFADVDAMVCYAMK 60

Query: 61  ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIY 120
           ANSN AVL  L RLG+G D+VS GEL R + AG    +++FSGVGKT  EM+ AL  GIY
Sbjct: 61  ANSNQAVLKTLGRLGAGLDVVSEGELRRALAAGIPAGRIMFSGVGKTAREMDFALEAGIY 120

Query: 121 CFNVESSAELEQLNDVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEV 180
           CFNVES  ELE LN  A R G+ APVS R+NPDVDA TH  ISTG KENKFGI+ + A  
Sbjct: 121 CFNVESEPELEVLNQRAVRAGRRAPVSFRINPDVDARTHAKISTGKKENKFGISWERARG 180

Query: 181 VFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLADQGIVIEHFDVGGGL 240
           V+A A  LP ++V G+D HIGSQ+TE+QPF DA   +  L+D L   G VIEH D+GGGL
Sbjct: 181 VYAHAAELPGIEVTGIDMHIGSQITELQPFDDAFKLLRELVDTLRSDGHVIEHVDIGGGL 240

Query: 241 GVTY--DDETPPHPDVYAAALLARLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDK 298
           G+ Y  D+  PP PD YA  +  +L     K++ EPGR I  NAGI VT+V+Y+K+  DK
Sbjct: 241 GIPYREDNNPPPLPDAYADIVKNQLKGLDCKIVTEPGRLIVGNAGILVTEVVYVKDGGDK 300

Query: 299 RFAIVDGAMNDLIRPALYSAWQNIIPVNPRDEQAQVF--DIVGPVCETGDFLGKDRALAI 356
            F IVDGAMNDLIRP LY A+  I PV      A     D+VGPVCETGD+L  DR +A+
Sbjct: 301 TFVIVDGAMNDLIRPTLYEAYHEIRPVKISAASAPRIKADVVGPVCETGDYLALDREMAM 360

Query: 357 -AAGDLLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQL 406
              GDL  + S+GAYG   A  YN+R    EV+V GD+ +++R R    +L
Sbjct: 361 PKPGDLFAIGSAGAYGAVQAGTYNSRLLVPEVLVKGDRFHVIRPRRDYDEL 411