Pairwise Alignments

Query, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella sp. ANA-3

Subject, 421 a.a., diaminopimelate decarboxylase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  188 bits (478), Expect = 2e-52
 Identities = 137/403 (33%), Positives = 212/403 (52%), Gaps = 26/403 (6%)

Query: 20  DLAQQYGTPLYIYSRATLERHWHAFNNAVADHP-HLVCYAVKANSNLAVLNVLARLGSGF 78
           +LA  +G+PLY+YS A L +       A++ HP   V Y+ KAN+NL++L ++   G   
Sbjct: 22  ELAAAFGSPLYVYSEALLRKRCRDM-KALSSHPGFFVNYSAKANTNLSLLRIVREEGLVV 80

Query: 79  DIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNDVAG 138
           D +S GE+     AG  P ++++     + AE+  A++ G+   +V+S ++LE L    G
Sbjct: 81  DAMSPGEIHVNKAAGFTPDQILYVCNNVSEAELANAVSHGL-LVSVDSLSQLETL----G 135

Query: 139 RLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEVVFARAHALPH-LQVKGVD 197
           R+ +   V +R NP + AG H  + T  K  KFG+   EA +   RA    H + + G++
Sbjct: 136 RVNRGGKVMVRFNPGIGAGHHQKVVTAGKATKFGVDPSEASLAELRAILARHDMTLAGIN 195

Query: 198 CHIGSQLTEIQPFLDAMDRMLALIDRLADQGIVIEHFDVGGGLGVTYDD-ETPPHPDVYA 256
            HIGS   E + ++ A D +L+    +A++   +E  D GGG G+ Y   E  P  D+ A
Sbjct: 196 QHIGSLFLEPEGYVAAADFLLS----VAEKFDTVEVIDFGGGFGIPYRKYEDQPRLDLAA 251

Query: 257 A-----ALLARLGDR---KLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMN 308
                 AL++   +R   K +   EPGR + A  G+ +  V   K N   R+   D   N
Sbjct: 252 TAERLHALISGWSERTGYKGRFYIEPGRYVVAECGLLLGTVHATKNNGPTRYVGTDLGFN 311

Query: 309 DLIRPALYSAWQNIIPVNPR---DEQAQVFDIVGPVCETGDFLGKDRAL-AIAAGDLLVV 364
            L RP +Y A  +I         D       +VG +CE+GD + ++R L AI  GD+L V
Sbjct: 312 VLARPVMYDAHHDIEVYRNNGTPDAALHPQTVVGNICESGDIMARERQLPAIQEGDILGV 371

Query: 365 RSSGAYGFAMASNYNTRPRAAEVMVDGD-KAYLVREREKLAQL 406
             +GAYG+AM+S YN R R AEV++  D +  L+R RE+LA L
Sbjct: 372 LDAGAYGYAMSSTYNQRLRPAEVLIGLDGEPRLIRRREELADL 414