Pairwise Alignments

Query, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella sp. ANA-3

Subject, 431 a.a., diaminopimelate decarboxylase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  380 bits (976), Expect = e-110
 Identities = 200/411 (48%), Positives = 270/411 (65%), Gaps = 5/411 (1%)

Query: 1   MDHFLYQDNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVK 60
           MDHF Y    L+AE   V+ +A   GTP Y+YS ATL RH+  F+ A++  PHLVC+A+K
Sbjct: 1   MDHFTYIKGQLHAEDVPVSAIADAVGTPFYVYSTATLTRHFKLFDEALSWGPHLVCFAMK 60

Query: 61  ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIY 120
           +NSN A+L +LA LG+G D+VSGGE AR   AG    ++VFSGVGKT  EM  AL  GI 
Sbjct: 61  SNSNQAILKLLADLGAGMDVVSGGEYARARAAGVPGDRIVFSGVGKTADEMRMALTGGIR 120

Query: 121 CFNVESSAELEQLNDVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEV 180
            FNVES  E+++L+ VA  LG  AP+++RVNPDVDA TH  I+TG  ENKFGI +  A  
Sbjct: 121 QFNVESEPEMQRLSAVAQGLGMQAPITIRVNPDVDAKTHEKIATGKSENKFGIPISRARE 180

Query: 181 VFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLADQGIVIEHFDVGGGL 240
           V+A+A  LP ++V G+D HIGSQLTE++PF  A  ++  L   L   G  I   D+GGGL
Sbjct: 181 VYAQAARLPGIKVIGIDVHIGSQLTELEPFELAYAKVAELTRHLRADGHEITRLDLGGGL 240

Query: 241 GVTY--DDETPPHPDVYAAALLARLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDK 298
           G+ Y   +E PP P  Y A +   +GD   ++  EPGR I+ NAG+ V++V+Y+K+  D+
Sbjct: 241 GIPYARTNEAPPLPTDYGALIQRTVGDLGCEIEIEPGRLISGNAGLLVSEVIYVKQGEDR 300

Query: 299 RFAIVDGAMNDLIRPALYSAWQNIIPVNPR--DEQAQVFDIVGPVCETGDFLGKDRALA- 355
           +F I+D AMNDLIRP++Y A+ +I+PV           +DIVGPVCE+GD   K R +  
Sbjct: 301 QFLILDAAMNDLIRPSMYGAYHDIVPVREAAPGTPTTPYDIVGPVCESGDTFAKSREMVP 360

Query: 356 IAAGDLLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQL 406
           +  GDL+  RS+GAYG  MAS YNTRP   EV+V GD+  ++R+R    ++
Sbjct: 361 LTEGDLVAFRSAGAYGAVMASEYNTRPLIPEVLVHGDQFAVIRQRPSFDEI 411