Pairwise Alignments

Query, 876 a.a., diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  209 bits (533), Expect = 4e-58
 Identities = 142/471 (30%), Positives = 229/471 (48%), Gaps = 19/471 (4%)

Query: 397 GAAIEKKLTAESLRRSYEELEEKVAARTTALAELNKDLEKEIRQRRNMEAKLVHDAKHDA 456
           G     ++T  ++R    E    VAA T            +I +R+  E  +   A  D 
Sbjct: 370 GPPYSGEMTVTAVRTRAGETTHYVAAIT------------DITKRKRDEEHIRFQANFDM 417

Query: 457 LTGLPNRAMFMERLNQAIKHVRRHSLEQFALLFIDLDRFKQINDTMGHLEGDRFLIETAT 516
           LT LPNR + M+RL QA+   +R    Q  ++F+DLDRFKQIND+ GH  GD  L  TA 
Sbjct: 418 LTHLPNRHLIMDRLEQAMHQAQRTG-RQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTAR 476

Query: 517 RLRACIRSNDTLARLGGDEFVILLDSINGINDARDVAERVIQKISLSYTLGAIEFHSGAS 576
           RLR C+R +D++ RLGGDEF+++L ++   +    +AE+++  +S  + +G  E     S
Sbjct: 477 RLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPS 536

Query: 577 IGITISGNKLDTSESMLRNADTAMYQAKANGKGCYVIFDDSASQQKMQDIAFENDFKQAL 636
           +GIT   +  +T+  +LRNAD AMY AK  G+  Y IF    +++ +  +  E+D + AL
Sbjct: 537 VGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHAL 596

Query: 637 QTGELQLQFWPIV--DLQTQQTQALECRLTWEHPQWGTIPQEILSQLAEQANLMVELDKY 694
              E +L F P V  DL     +AL   + W HP+ G I       LAE++ L++ + ++
Sbjct: 597 ARDEFELHFQPKVRADLTLIGAEAL---IRWRHPEKGLINPGDFIPLAEESGLILPIGRW 653

Query: 695 TISLLDKSYHQLLANQGDKVELHLMLSSQHLKHKHALRGLKNALKQTKLALPQLWLFFNE 754
           T+           A       + + +S +  + +  +  ++  L +T L    L L   E
Sbjct: 654 TLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITE 713

Query: 755 KALVLETENHINGFELLKKLDVNLGISHYGSGHSSLNSLLFLPIKGLKLDANITKQ-LQD 813
             +  + E+ +     LK L V L I  +G+G+SSLN L   PI  LK+D    +  L  
Sbjct: 714 TVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHS 773

Query: 814 EQHIKLMSAYQKAASTLDLQTFVDGLQSAEQIKIFHALGYRFGQGGALASP 864
            +   ++S     A  L      +G++  EQ +   +   +  QG   + P
Sbjct: 774 GKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRP 824