Pairwise Alignments
Query, 839 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3
Subject, 871 a.a., RND transporter from Burkholderia phytofirmans PsJN
Score = 108 bits (269), Expect = 2e-27
Identities = 185/856 (21%), Positives = 326/856 (38%), Gaps = 133/856 (15%)
Query: 45 KVQSDILAMLPHLQQDALTARALEQVESTLADQVYLALIAKDEPQAIAAATLLMEQLKTQ 104
K+ +DI ++ + +Q + A+++ V + + A+ A AAA L LK
Sbjct: 40 KINTDISRLIENDKQWSALEHAVDEAFPDRGQTVLVVVEARAPEFADAAAQALTTALKAD 99
Query: 105 NTAFTDIRSADLQMGEALGQFYLPYRFKLLTPEQTEALSHNGLEHLIASATQQLYNAFSY 164
F + A G F+ LL P E +S L+ S + L NA ++
Sbjct: 100 PKEFVAVSQP------AGGPFF--EHNGLLFPSLDEVMSTTS--QLVQS--RPLVNALAH 147
Query: 165 ANSQL-----LTQDPLLLFPDNLLALAPSSKLSANQG-----ILLAHPQSVDTKQGVNSS 214
S LT LL + L S L + +L P + + V+ S
Sbjct: 148 DPSLTGLAGTLTTSLLLPLQLGQVKLGDMSHLLSQSASTLDRVLAGQPAAFSWRALVDKS 207
Query: 215 EGVA-----AIVMAKGTESAFNPNAQLRQQAALTQALNAVSAQYPSIKVLQAGALFHAIE 269
IV A P A + T A + ++Y +I V G A E
Sbjct: 208 AAAEPARAFVIVQPVVNYDALEPGASASKSIRDTAAALHLESRYGAI-VRLTGEQPLADE 266
Query: 270 ATNTAKSEISVLGLASLLGVVLLVWLAFRSVMPLLLAMVTIGSGLLLAVTFTLSVFGELH 329
+ K ++ G+ + + V++++WLA RS + +T+ GL + L + G L+
Sbjct: 267 EFASVKDGAALNGIGTFIVVLIILWLALRSGRMIAAVFITLFVGLAITAALGLMLVGALN 326
Query: 330 LLTLVFGTSLIGIAIDYSFHFYCERLSDHQRSAQATVAYIFPT------VSLAFITSALA 383
++++ F +G+ +D+ F + + R + + A + + ++LA I AL+
Sbjct: 327 MISVAFMVLFVGLGVDFGVQFGVKYREERNRDNRLSAALMHTSHSIGVPLTLAAIAVALS 386
Query: 384 YVGIGLAPFPGMQQVAIFCASGLLGAYLTLVLAYPLLAGSKLPSGERPLNLAQAYLAKLT 443
+ + G+ ++ G+ AY T + P L P GE + LA +
Sbjct: 387 FFSFLPTAYRGVSELGEIAGVGMFVAYFTNMTLLPALLKIFRPPGEAG-SPGFKQLAPVD 445
Query: 444 GFSNKLISPWGLSLFALVLAGVCLLGISKLNVDDDIRHLQQSPASVTEPEDKLRKLLSGG 503
F + P + +V+ LL + L D + HL+ E
Sbjct: 446 DFLDHHRKPVLIGTLIVVIGASPLL--THLRFDFNPLHLKDPHTESMET----------- 492
Query: 504 TDNQFLLVRAPSEEALLQRLEALSPQLDAAIKQ-------QELGNYISLSRYLPSKQKQ- 555
LL S EA + + L+P L A + E+G +L ++P+ Q+Q
Sbjct: 493 -----LLSLKDSPEAAVNNVHVLAPSLADADRMAAHLRTLPEVGRVNTLDTFVPADQQQK 547
Query: 556 -----DAAYQLQSKIYQ---SQLTTVLN-----------SIGLDDGLAP----------- 585
AA QL + Q Q T + S+ DD P
Sbjct: 548 LMLIASAAQQLLPALQQQPAQQATDAIRVAALKRASNQLSLAADDHPGPGAAEAKHLSAT 607
Query: 586 --ELSATYLAAKD------------------SYITPTDFFELGLGKQLAPLWLAPQGFAP 625
+L+AT A +D + + PT+ L K+++ W++ G A
Sbjct: 608 LQKLAATDAATRDRAETAMSETLRIALKQLANLLQPTEITYENLPKEISKAWVSKDGRAL 667
Query: 626 LGHSTESATSPDNANLGNDSHGTIVLLGGIEDIAALKARFVEDPLVQLIDKVADISTVMG 685
+ S + G D + ++L + + + P I + T++
Sbjct: 668 VDISPK-------VKPGTDPNDDVMLAHFAHAVKKAEPGAIGGP----ISILHSADTIIK 716
Query: 686 HYRLLTLKLLGLALVIALLLFSLSFGVKRAALVVAVPAL-AALLTLAILGLAGSPLSLFH 744
+ L+ G ALV +L ++ L VP L +AL+TL + + G PL+ +
Sbjct: 717 AF----LQAAGYALVSIAILLWIALRRVGDMLRTLVPLLVSALVTLELCVVFGMPLNFAN 772
Query: 745 ALALILVFGIGIDYSLFFASAAQHGKAVMM------AVFMSACSTLLAFGLLAFSQTQAI 798
+AL L+ G+G+ + ++F A +HG+ ++ AV SA +T AFG L S
Sbjct: 773 IIALPLMLGVGVAFKIYFVMAWRHGQTGLLQSSLTHAVLFSAATTATAFGSLWLSHHPGT 832
Query: 799 HYFGLTLSLGIGFTFV 814
G L+L + T +
Sbjct: 833 SSMGRLLALSLFCTLI 848
Score = 40.0 bits (92), Expect = 6e-07
Identities = 36/172 (20%), Positives = 77/172 (44%), Gaps = 8/172 (4%)
Query: 255 SIKVLQAGALFHAIEATNTAKSEISVLGLAS---LLGVVLLVWLAFRSVMPLLLAMVTIG 311
++K + GA+ I ++A + I A+ L+ + +L+W+A R V +L +V +
Sbjct: 692 AVKKAEPGAIGGPISILHSADTIIKAFLQAAGYALVSIAILLWIALRRVGDMLRTLVPLL 751
Query: 312 SGLLLAVTFTLSVFG-ELHLLTLVFGTSLIGIAIDYSFHFYCERLSDHQRSAQATVAYIF 370
L+ + + VFG L+ ++ ++G+ + + +F Q+++ +
Sbjct: 752 VSALVTLELCV-VFGMPLNFANIIALPLMLGVGVAFKIYFVMAWRHGQTGLLQSSLTH-- 808
Query: 371 PTVSLAFITSALAYVGIGLAPFPGMQQVAIFCASGLLGAYLTLVLAYPLLAG 422
V + T+A A+ + L+ PG + A L + V+ P+L G
Sbjct: 809 -AVLFSAATTATAFGSLWLSHHPGTSSMGRLLALSLFCTLIGAVVFQPVLMG 859