Pairwise Alignments

Query, 839 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 803 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  317 bits (812), Expect = 2e-90
 Identities = 260/829 (31%), Positives = 417/829 (50%), Gaps = 62/829 (7%)

Query: 13  LMQTSTKWRF---AIWLCLMLAASLWTLQLWQNGAKVQSDILAMLPHLQQDALTARALEQ 69
           L Q S K  +   A WL L LAA+L+    +   + +Q+++LA+LP  + D +  +A++ 
Sbjct: 4   LQQRSAKQAWGMRAAWLLLALAAALYCGWRFAGPSPLQTNLLALLPATEADPVAEKAVDT 63

Query: 70  VESTLADQVYLALIAKDEPQAIAAATLLMEQLKTQN---TAFTDIRSADLQMGEALGQFY 126
           + S L D+    + + D+  A AAA  L   L+      +   ++   DL    AL   Y
Sbjct: 64  LASALGDRTVFLVTSNDDAHAKAAAKQLGASLQKSGAFGSVTAELPPFDLSQIAAL---Y 120

Query: 127 LPYRFKLLTPEQTEALSHN--GLEHLIASATQQLYNAFSYANSQLLTQDPLLLFPDNLLA 184
           +PYRF LL P    AL+    G   L  +  Q++Y+      +  L+ DP       L  
Sbjct: 121 MPYRFGLLAPADRAALASGTVGTTTLHDALAQRIYSPLRGGLTTPLSDDPFGWLEHWLGG 180

Query: 185 LA-PSSKLSANQGILLAHPQSVDTKQGVNSSEGVAAIVMAKGTESAFNPNAQLRQQAALT 243
           L   +S L     +L+AH       QG  +S     +++A    SA+    Q    A+L 
Sbjct: 181 LPLATSNLELEDNMLVAH-------QGAATS----VLIVATLPGSAYETKTQHAVLASLA 229

Query: 244 QALNAVSAQYPSIKVLQAGALFHAIEATNTAKSEISVLGLASLLGVVLLVWLAFRSVMPL 303
           Q  + +   +P + V + GA+F+A  A + ++ E+ ++GLASL G+ LL+   FRS   L
Sbjct: 230 QGESTLKQSFPDVSVARTGAVFYAESARSASEHEVHLIGLASLCGIALLMMWVFRSPRLL 289

Query: 304 LLAMVTIGSGLLLAVTFTLSVFGELHLLTLVFGTSLIGIAIDYSFHFY-----CERLSDH 358
           LL  V+   G++ A+  T+ VFG+LHLLTLVFG SLIG A+DYS  ++      +R  D 
Sbjct: 290 LLGFVSTALGIVCALAVTMLVFGKLHLLTLVFGASLIGEAVDYSIQYFVVYLGAQRDWDA 349

Query: 359 QRSAQATVAYIFPTVSLAFITSALAYVGIGLAPFPGMQQVAIFCASGLLGAYLTLVLAYP 418
           +R A+A    + P +S+A  TS L Y  +   PFP ++Q+A F  +G+  A+ +++   P
Sbjct: 350 RRGARA----VRPALSVALATSLLGYAILTWVPFPALKQIACFAIAGITTAFASVLWLLP 405

Query: 419 LLAGSKLPSGERPLNLAQAYLAKLTGFSNKLISPWGLSLFALVLAGVCLLGISKLNVDDD 478
            L  ++ P  +R      A  A++    ++ I        A +L  + + G  +L  DDD
Sbjct: 406 ALL-TRAP--KRSPKRVFAGAARVLTVWHRTIGGRRAWFVAALLLLLAIPGWLRLTSDDD 462

Query: 479 IRHLQQSPASVTEPEDKLRKLLSGGTDNQFLLVRAPSEEALLQRLEALSPQLDAAI-KQQ 537
           I  L Q   ++   EDK+R  +      QF +VR  + E +LQR EAL  +LDA      
Sbjct: 463 IHLLIQRDPALVAQEDKVRAAVGVDNSAQFFVVRGETPEVVLQRAEALGTKLDALNGTAD 522

Query: 538 ELGNYISLSRYLPS-KQKQDAAYQLQSKIYQSQLTTVLNSIGLDDGLAPELSATYLAAKD 596
           ++G+Y S+++++PS KQ+ +    L   ++  +    L +  L  G   E++  +LAA  
Sbjct: 523 KVGSYQSVAQFVPSAKQQNEDRALLSQHVFNDR--AALRATLLQAGFKDEVADAWLAA-- 578

Query: 597 SYITPTDFFELGLGKQLAPLWLAPQGFAPLGHSTESATSPDNANLGNDSHGTIVLLGGI- 655
            Y  P     L +   LA  W  P     LG   +S+T          ++  +V+  G+ 
Sbjct: 579 -YAKPQ--APLTIDTWLATPWSQPYKHLWLG-EVDSSTK---------AYAAVVIPQGVT 625

Query: 656 -EDIAALKARFVEDPLVQLIDKVADISTVMGHYRLLTLKLLGLALVIALLLFSLSFGVKR 714
            ++  AL A       V  +DK A +S + G YR+ +   LG AL + L+L  L + V R
Sbjct: 626 PQNEPALIAAAQGLSGVVFVDKAASVSKLFGAYRVDSGWWLGGALALVLVLLMLRYKV-R 684

Query: 715 AALVVAVPALAAL-LTLAILGLAGSPLSLFHALALILVFGIGIDYSLFFASAAQHGK--- 770
             + V +P L A+ +TLA+ G A  PL+LF+ LAL+LV G+G +Y++F            
Sbjct: 685 GGIAVTLPVLLAVGVTLAVFGYAHVPLNLFNWLALMLVLGVGANYAVFLREGCLRADADL 744

Query: 771 -AVMMAVFMSACSTLLAFGLLAFSQTQAIHYFGLTLSLGIGFTFVLSPL 818
            AV   V +SA +TLL+FG+L  S   A+  FG TL+LGI  + +L+P+
Sbjct: 745 GAVWTGVLLSAATTLLSFGMLGMSAMPALESFGATLALGIAVSVLLAPI 793