Pairwise Alignments

Query, 137 a.a., outer membrane protein, putative (RefSeq) from Shewanella sp. ANA-3

Subject, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 42.4 bits (98), Expect = 6e-09
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 25/138 (18%)

Query: 1   MKKLSLVAVSLLSALVAGQASAAADTTGFYVGGALNRVAVDVV-----DDSDTGTGFGVY 55
           MKKL+ +   + + L+   ++A A+    YVGG + +  +D          D     G +
Sbjct: 1   MKKLAAI---ISATLLFASSAAVAEV---YVGGKVGKSWLDDACLAGQSCEDDDQVVGAF 54

Query: 56  GGYNFNEWFGLEANL-----FATADLGDRDTDVTAGALTFTPKFTLQINDMFSAYAKVGV 110
            GY  N+W  LEA       F  A L D        A+T  PK ++ + +  + Y KVG 
Sbjct: 55  LGYQANKWLSLEAGYDYLGKFTAAGLNDEKVQ----AVTLAPKLSIPLTEGIALYGKVGG 110

Query: 111 ASMAMNFDGFGFDEDFTW 128
           A     +  +G  +D+++
Sbjct: 111 A-----YVDYGSKDDYSY 123