Pairwise Alignments

Query, 168 a.a., peptide deformylase (RefSeq) from Shewanella sp. ANA-3

Subject, 172 a.a., Peptide deformylase (NCBI) from Rhodospirillum rubrum S1H

 Score =  137 bits (345), Expect = 9e-38
 Identities = 84/171 (49%), Positives = 103/171 (60%), Gaps = 3/171 (1%)

Query: 1   MALLKVLRFPDERLRTQATPVTEFTAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIV 60
           MALL +L  PD RL  +A PV      ++  +DDM ETMY   GIGLAA QV   K++IV
Sbjct: 1   MALLPILTAPDPRLTKKALPVETVDVSIRKLMDDMLETMYLAPGIGLAAPQVGVLKRVIV 60

Query: 61  MD--LQDEVDRPKVFINPEIIASSGDFCN-EEGCLSVPGIYAKVDRAEFVTVKALDRHGN 117
           +D   +DE  RP    NPEII SS D    EEGCLSVP  Y  V R + V V+ LD    
Sbjct: 61  LDPAREDEAPRPMRLANPEIIWSSEDTKPYEEGCLSVPEQYDTVVRPDRVRVRYLDPDNE 120

Query: 118 EFTVEADELFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAARQDAK 168
              ++AD L A+ +QHE+DHL G LFVDYLS LKR  + +KL K  R  A+
Sbjct: 121 IREIDADGLLAVILQHEIDHLDGILFVDYLSSLKRNMMLRKLRKMKRTGAE 171