Pairwise Alignments

Query, 168 a.a., peptide deformylase (RefSeq) from Shewanella sp. ANA-3

Subject, 175 a.a., peptide deformylase from Rhodopseudomonas palustris CGA009

 Score =  157 bits (397), Expect = 9e-44
 Identities = 85/173 (49%), Positives = 114/173 (65%), Gaps = 5/173 (2%)

Query: 1   MALLKVLRFPDERLRTQATPVTEFTAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIV 60
           MAL +++  PD+RLR  + PVTE T E++   DDMFE+MY+  GIGLAA Q+    +LI 
Sbjct: 1   MALREIIILPDKRLREISKPVTEVTTEIRKLADDMFESMYEAPGIGLAAIQIAEPVRLIT 60

Query: 61  MDLQ----DEVDRPKVFINPEIIASSGDF-CNEEGCLSVPGIYAKVDRAEFVTVKALDRH 115
           MD+     D    P+ FINPEI+ +S +    EEGCLS+P  YA+V+R + V ++  D  
Sbjct: 61  MDIVRKEGDGKSDPRAFINPEIVGASSEMNVYEEGCLSIPEYYAEVERPKTVRIRYTDLD 120

Query: 116 GNEFTVEADELFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAARQDAK 168
           GN    +AD LFA CIQHE+DHL G LFVD+LS LKR  + +K EKAA++  K
Sbjct: 121 GNVKEEDADGLFATCIQHEIDHLNGVLFVDHLSKLKRAMVIRKFEKAAKRGIK 173