Pairwise Alignments

Query, 429 a.a., sun protein (RefSeq) from Shewanella sp. ANA-3

Subject, 440 a.a., ribosomal RNA small subunit methyltransferase RsmB from Pseudomonas stutzeri RCH2

 Score =  354 bits (909), Expect = e-102
 Identities = 208/431 (48%), Positives = 263/431 (61%), Gaps = 7/431 (1%)

Query: 2   MNLRALAAKAIFEVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRVA 61
           MN R  AA+A+  VL    SL  +LPE    +   +D+ L  +L +G  R  P++     
Sbjct: 1   MNPRLAAARALSVVLSGKASLGSSLPEVLGKV-DARDRGLTQDLAFGTARWQPRLAGLAD 59

Query: 62  ECLAKPLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLR 121
           + L KP K   R +  LL+VG YQL+++RIP+HAAI ET     +LK      ++N VLR
Sbjct: 60  KLLQKPFKAADRDVEALLLVGLYQLFYSRIPAHAAIGETVGCVDKLKKPWAKGLLNAVLR 119

Query: 122 NIQRQLTPLSTESE---TLSYNTPGWLIKRLKAAYPDNWQEIIQQSHERPPMWLRNNRLS 178
             QR+   L  E E    +    P WL K LKA +P++W+ I   ++  PPM LR NR  
Sbjct: 120 RAQREGEALLAELEHDPVIRVAHPRWLQKALKAHWPEHWEAICAANNAHPPMMLRVNRRQ 179

Query: 179 QSRDAYLAALSELEIEAS-AGLSDDAILLAHPKDVATLPRFHEGAASVQDGAAQWAATLL 237
            SRD YLA L    IEA     S+D I LA P DV  LP F EG  SVQD AAQ AA+LL
Sbjct: 180 VSRDGYLAELQGAGIEAHPCEFSEDGIRLAAPCDVHQLPGFAEGRVSVQDEAAQLAASLL 239

Query: 238 APQANELVLDACAAPGGKSCHLLELEPSIQ-LVAVDFDAKRLERVQQNLDRLSLKAEVIH 296
                + VLDAC APGGK+CHLLE EP +  LVA+D + KRL RV++NL+RL L+AE++ 
Sbjct: 240 DLAPGQRVLDACCAPGGKTCHLLEREPQLAGLVALDLEPKRLLRVRENLERLHLQAELVA 299

Query: 297 GDAANIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCW 356
            DA   + WW G+ F RILLDAPCSATGVIRRHPDIK  R+  DI  LA LQ ++LD  W
Sbjct: 300 DDARATERWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQADDIAPLAALQGEMLDALW 359

Query: 357 KWLKPGGTLLYATCSILPQENRDQISAFLARTADAK-LDTLAQQASSQDIGWQITPGQHN 415
             L+ GG LLYATCS+LP ENR+ I+AFL RT  A+ LD        Q  G Q+ P +  
Sbjct: 360 PTLEVGGVLLYATCSVLPTENREVIAAFLERTPGARELDLAGGFGLPQMHGRQLLPQESG 419

Query: 416 MDGFYYARLLK 426
            DGFYYA+L+K
Sbjct: 420 HDGFYYAKLIK 430