Pairwise Alignments

Query, 429 a.a., sun protein (RefSeq) from Shewanella sp. ANA-3

Subject, 445 a.a., ribosomal RNA small subunit methyltransferase RsmB from Dechlorosoma suillum PS

 Score =  288 bits (736), Expect = 3e-82
 Identities = 179/423 (42%), Positives = 234/423 (55%), Gaps = 14/423 (3%)

Query: 7   LAAKAIFEVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRVAECLAK 66
           L A A    ++ G SL+  L +Q K    G  +A   +L YG +R     E  +A  L K
Sbjct: 32  LLASAAVAAVQAGRSLTEVLAQQAKG-ELGPTRAQAQDLAYGALRRYGWGEAVLAALLQK 90

Query: 67  PLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLRNIQRQ 126
           PL   Q  +  LL+   Y+L      SH  + +   A   L       V+NGVLR+  RQ
Sbjct: 91  PLPEPQ--LQSLLLCALYRLESRPEQSHTVVDQAVAAAATLAKGNFRGVINGVLRSYLRQ 148

Query: 127 LTPLSTESE---TLSYNTPGWLIKRLKAAYPDNWQEIIQQSHERPPMWLRNNRLSQSRDA 183
              L   +    + ++  P W + RL+ AYP +W+ I    + +PPM LR N    SR+ 
Sbjct: 149 RPELLARAAGKPSGAWWHPDWWLSRLRRAYPRDWEAIATAGNGQPPMTLRVNLARGSREE 208

Query: 184 YLAALSELEIEASAGLSDDAILLAHPKDVATLPRFHEGAASVQDGAAQWAATLLAPQANE 243
           Y A L    I A+  L   A+LL  P  V  LP F +G  SVQD  AQ AA LL  +A +
Sbjct: 209 YQARLDAAGI-AAVPLGSAALLLQKPVPVDALPGFFDGFVSVQDWGAQRAAELLDARAGQ 267

Query: 244 LVLDACAAPGGKSCHLLELEPSIQLVAVDFDAKRLERVQQNLDRLSLKAEVIHGDAANID 303
            VLDACAAPGGK+ H+LE +  + L+A+D D  R  RV++NL RL L+A V   DA   D
Sbjct: 268 RVLDACAAPGGKTAHILE-QAGVDLLALDMDGLRCRRVEENLSRLGLRAVVRAADARCPD 326

Query: 304 SWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWLKPGG 363
            WW G  FDRIL D PCSA+GV+RRHPD KWLR+  DI + A +QRQIL+  W  L  GG
Sbjct: 327 DWWDGRPFDRILADVPCSASGVVRRHPDSKWLRRETDIAQFARVQRQILEVLWPTLAVGG 386

Query: 364 TLLYATCSILPQENRDQISAFLARTADAKLDTLAQQASSQDIGWQITPGQHNMDGFYYAR 423
            LLYATCS+ P+EN  Q+SAFLAR  DA+   +    + +    Q+ PG  + DGFYYA 
Sbjct: 387 RLLYATCSVFPEENSQQVSAFLARHGDAR--RIGIDGADE---LQLLPGSEH-DGFYYAL 440

Query: 424 LLK 426
           L K
Sbjct: 441 LEK 443