Pairwise Alignments

Query, 491 a.a., sensor kinase CusS (RefSeq) from Shewanella sp. ANA-3

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score =  131 bits (330), Expect = 6e-35
 Identities = 89/330 (26%), Positives = 169/330 (51%), Gaps = 36/330 (10%)

Query: 181 LDALKKNLIAIAVVISLLIVLIIRIAVRQGHL-PLRNVSNAIKSITSENLDTR------- 232
           L A  +N   +  +I LLI LI+   + +G + PL  +    + +++   D +       
Sbjct: 310 LQADVRNQTFVVGLIGLLIALIVSYLINRGIIKPLEQLKQGAEWVSNGRYDQKVIVDSDD 369

Query: 233 -----------------LEPTRVPIELEQLVISFNHMIGKIEDVFTRQANFSADIAHEIR 275
                            +   ++    E+L IS+N    +++++   ++   A ++HE+R
Sbjct: 370 EFGELAKAFNKMATQINISDDKLKKHAEELKISYN----ELKELDKLKSELIAVVSHELR 425

Query: 276 TPITNLVTQTEIALSQDRTQKELEDVLYSSLEEYN----RMTKMVSDMLFLAQADNNQLI 331
           TP+T++    E+ L  D T   + D     L+  +    R+ +++  ML L++ +  +L 
Sbjct: 426 TPLTSIKGYVELVL--DGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELE 483

Query: 332 PDRVRFDLRAEVMKVFEFFEAWAEERNITLKFNGMPCLVEGDPQMFRRAINNLLSNALRY 391
             R + +LR+ V  V E+ +  A E+NI L        +E D     + + NL+ NA+++
Sbjct: 484 MYREKVNLRSIVCDVIEYLKPLATEKNIKLNKEVEDIAIEADKDRITQVLTNLIENAIKF 543

Query: 392 TPEGQAITVSIREQESFFDLVIENPGKPIPEEHLSRLFDRFYRVDPSRQRKGEGSGIGLA 451
           +P  ++I VS   ++    L + + G  IP++ + ++F+RFY+VD S +RK  GSG+GLA
Sbjct: 544 SPANESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLA 603

Query: 452 IVKSIVEAHHGRVQVESDV-RSTRFILSVP 480
           + KSIVEAH G + VES++ + + F + +P
Sbjct: 604 VCKSIVEAHKGSIWVESELGKGSTFHIILP 633