MetaCyc Pathway: L-fucose degradation III in Cupriavidus basilensis FW507-4G11
α-L-fucopyranose→β-L-fucopyranose (spontaneous) (EC 5.1.3.29) |
No genes |
β-L-fucopyranose + NADP+→L-fucono-1,5-lactone + NADPH + H+ (EC 1.1.1.435) |
No genes |
L-fucono-1,5-lactone→L-fucono-1,4-lactone (spontaneous) |
No genes |
L-fucono-1,5-lactone + H2O→L-fuconate + H+ (EC 3.1.1.120) |
No genes |
L-fucono-1,4-lactone + H2O→L-fuconate + H+ (EC 3.1.1.120) |
No genes |
L-fuconate dehydratase: L-fuconate→2-dehydro-3-deoxy-L-fuconate + H2O (EC 4.2.1.68) |
No genes |
2-dehydro-3-deoxy-L-fuconate + NAD+→2,4-didehydro-3-deoxy-L-fuconate + NADH + H+ (EC 1.1.1.434) |
RR42 |
2,4-didehydro-3-deoxy-L-fuconate + H2O→(S)-lactate + pyruvate + H+ (EC 3.7.1.26) |
RR42 |
Links:
- Pathway details at MetaCyc
- Fitness data for 2 genes
- All MetaCyc pathways for Cupriavidus basilensis FW507-4G11
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information