| Pathway | Steps Found |
|---|
| superpathway of fatty acids biosynthesis (E. coli) | 50 / 53 |
| superpathway of histidine, purine, and pyrimidine biosynthesis | 44 / 46 |
| superpathway of fatty acid biosynthesis II (plant) | 38 / 43 |
| palmitate biosynthesis II (type II fatty acid synthase) | 29 / 31 |
| superpathway of purine nucleotides de novo biosynthesis I | 21 / 21 |
| superpathway of purine nucleotides de novo biosynthesis II | 24 / 26 |
| superpathway of aromatic amino acid biosynthesis | 18 / 18 |
| superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis | 18 / 18 |
| aspartate superpathway | 23 / 25 |
| tRNA charging | 20 / 21 |
| superpathway of branched chain amino acid biosynthesis | 17 / 17 |
| superpathway of unsaturated fatty acids biosynthesis (E. coli) | 19 / 20 |
| superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass | 23 / 26 |
| oleate β-oxidation | 29 / 35 |
| superpathway of L-isoleucine biosynthesis I | 13 / 13 |
| superpathway of L-tryptophan biosynthesis | 13 / 13 |
| superpathway of L-methionine biosynthesis (by sulfhydrylation) | 12 / 12 |
| superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle | 19 / 22 |
| colanic acid building blocks biosynthesis | 11 / 11 |
| superpathway of L-lysine, L-threonine and L-methionine biosynthesis I | 16 / 18 |
| oleate biosynthesis IV (anaerobic) | 13 / 14 |
| L-arginine biosynthesis II (acetyl cycle) | 10 / 10 |
| L-histidine biosynthesis | 10 / 10 |
| TCA cycle III (animals) | 10 / 10 |
| superpathway of L-phenylalanine biosynthesis | 10 / 10 |
| superpathway of L-tyrosine biosynthesis | 10 / 10 |
| superpathway of arginine and polyamine biosynthesis | 15 / 17 |
| superpathway of glycolysis and the Entner-Doudoroff pathway | 15 / 17 |
| superpathway of chorismate metabolism | 45 / 59 |
| Entner-Doudoroff pathway I | 9 / 9 |
| L-arginine biosynthesis I (via L-ornithine) | 9 / 9 |
| L-lysine biosynthesis I | 9 / 9 |
| TCA cycle II (plants and fungi) | 9 / 9 |
| aromatic compounds degradation via β-ketoadipate | 9 / 9 |
| folate transformations III (E. coli) | 9 / 9 |
| lipid IVA biosynthesis (P. gingivalis) | 9 / 9 |
| palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) | 9 / 9 |
| pyrimidine deoxyribonucleotides de novo biosynthesis I | 9 / 9 |
| superpathway of pyrimidine ribonucleotides de novo biosynthesis | 9 / 9 |
| superpathway of sulfate assimilation and cysteine biosynthesis | 9 / 9 |
| superpathway of fatty acid biosynthesis I (E. coli) | 14 / 16 |
| L-tryptophan degradation IX | 11 / 12 |
| L-tryptophan degradation XII (Geobacillus) | 11 / 12 |
| gluconeogenesis III | 11 / 12 |
| homolactic fermentation | 11 / 12 |
| peptidoglycan biosynthesis I (meso-diaminopimelate containing) | 11 / 12 |
| superpathway of glyoxylate bypass and TCA | 11 / 12 |
| superpathway of tetrahydrofolate biosynthesis and salvage | 11 / 12 |
| superpathway of anaerobic sucrose degradation | 16 / 19 |
| UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) | 8 / 8 |
| pentose phosphate pathway | 8 / 8 |
| superpathway of adenosylcobalamin salvage from cobinamide I | 8 / 8 |
| Bifidobacterium shunt | 13 / 15 |
| biotin biosynthesis I | 13 / 15 |
| superpathway of L-lysine, L-threonine and L-methionine biosynthesis II | 13 / 15 |
| O-antigen building blocks biosynthesis (E. coli) | 10 / 11 |
| folate transformations II (plants) | 10 / 11 |
| glycolysis II (from fructose 6-phosphate) | 10 / 11 |
| glycolysis III (from glucose) | 10 / 11 |
| heterolactic fermentation | 15 / 18 |
| mandelate degradation to acetyl-CoA | 15 / 18 |
| superpathway of L-threonine metabolism | 15 / 18 |
| L-glutamate and L-glutamine biosynthesis | 7 / 7 |
| L-isoleucine biosynthesis I (from threonine) | 7 / 7 |
| anaerobic energy metabolism (invertebrates, cytosol) | 7 / 7 |
| chorismate biosynthesis I | 7 / 7 |
| picolinate degradation | 7 / 7 |
| superpathway of salicylate degradation | 7 / 7 |
| superpathway of purine nucleotide salvage | 12 / 14 |
| superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) | 12 / 14 |
| meta cleavage pathway of aromatic compounds | 9 / 10 |
| TCA cycle I (prokaryotic) | 9 / 10 |
| superpathway of coenzyme A biosynthesis II (plants) | 9 / 10 |
| superpathway of heme b biosynthesis from glutamate | 9 / 10 |
| superpathway of tetrahydrofolate biosynthesis | 9 / 10 |
| superpathway of glucose and xylose degradation | 14 / 17 |
| L-leucine biosynthesis | 6 / 6 |
| L-tryptophan biosynthesis | 6 / 6 |
| NAD de novo biosynthesis I | 6 / 6 |
| NAD de novo biosynthesis III | 6 / 6 |
| TCA cycle VIII (Chlamydia) | 6 / 6 |
| UMP biosynthesis I | 6 / 6 |
| UMP biosynthesis II | 6 / 6 |
| adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide | 6 / 6 |
| catechol degradation III (ortho-cleavage pathway) | 6 / 6 |
| glyoxylate cycle | 6 / 6 |
| inosine-5'-phosphate biosynthesis I | 6 / 6 |
| lipid IVA biosynthesis (E. coli) | 6 / 6 |
| lipid IVA biosynthesis (H. pylori) | 6 / 6 |
| lipid IVA biosynthesis (P. putida) | 6 / 6 |
| lipid IVA biosynthesis (Vibrio cholerae serogroup O1 El Tor) | 6 / 6 |
| lipid IVA biosynthesis (generic) | 6 / 6 |
| nicotinate degradation I | 6 / 6 |
| phosphatidylglycerol biosynthesis I | 6 / 6 |
| phosphatidylglycerol biosynthesis II | 6 / 6 |
| ppGpp metabolism | 6 / 6 |
| purine deoxyribonucleosides salvage | 6 / 6 |
| superpathway of 5-aminoimidazole ribonucleotide biosynthesis | 6 / 6 |
| superpathway of L-threonine biosynthesis | 6 / 6 |
| superpathway of guanosine nucleotides de novo biosynthesis I | 6 / 6 |
| tetrapyrrole biosynthesis I (from glutamate) | 6 / 6 |
| gluconeogenesis I | 11 / 13 |
| glycolysis I (from glucose 6-phosphate) | 11 / 13 |
| L-arginine biosynthesis III (via N-acetyl-L-citrulline) | 8 / 9 |
| NAD de novo biosynthesis II (from tryptophan) | 8 / 9 |
| TCA cycle V (2-oxoglutarate synthase) | 8 / 9 |
| flavin biosynthesis I (bacteria and plants) | 8 / 9 |
| methylerythritol phosphate pathway II | 8 / 9 |
| pyrimidine deoxyribonucleotides de novo biosynthesis III | 8 / 9 |
| superpathway of adenosylcobalamin salvage from cobinamide II | 8 / 9 |
| superpathway of coenzyme A biosynthesis I (bacteria) | 8 / 9 |
| 2-methylcitrate cycle I | 5 / 5 |
| 5-aminoimidazole ribonucleotide biosynthesis I | 5 / 5 |
| 5-aminoimidazole ribonucleotide biosynthesis II | 5 / 5 |
| cis-vaccenate biosynthesis | 5 / 5 |
| L-histidine degradation II | 5 / 5 |
| L-ornithine biosynthesis I | 5 / 5 |
| L-tyrosine degradation I | 5 / 5 |
| NAD salvage pathway II (PNC IV cycle) | 5 / 5 |
| UDP-N-acetyl-D-glucosamine biosynthesis I | 5 / 5 |
| adenosylcobalamin salvage from cobalamin | 5 / 5 |
| adenosylcobinamide-GDP salvage from cobinamide I | 5 / 5 |
| adipate biosynthesis | 5 / 5 |
| adipate degradation | 5 / 5 |
| catechol degradation I (meta-cleavage pathway) | 5 / 5 |
| chorismate biosynthesis from 3-dehydroquinate | 5 / 5 |
| dTDP-β-L-rhamnose biosynthesis | 5 / 5 |
| ethanolamine utilization | 5 / 5 |
| fatty acid elongation -- saturated | 5 / 5 |
| inosine-5'-phosphate biosynthesis II | 5 / 5 |
| pentose phosphate pathway (non-oxidative branch) I | 5 / 5 |
| polyisoprenoid biosynthesis (E. coli) | 5 / 5 |
| superpathway of adenosine nucleotides de novo biosynthesis I | 5 / 5 |
| superpathway of coenzyme A biosynthesis III (mammals) | 5 / 5 |
| formaldehyde assimilation III (dihydroxyacetone cycle) | 10 / 12 |
| superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) | 10 / 12 |
| superpathway of phospholipid biosynthesis III (E. coli) | 10 / 12 |
| superpathway of ubiquinol-8 biosynthesis (early decarboxylation) | 10 / 12 |
| hexitol fermentation to lactate, formate, ethanol and acetate | 15 / 19 |
| L-histidine degradation VI | 7 / 8 |
| UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) | 7 / 8 |
| nitrogen remobilization from senescing leaves | 7 / 8 |
| partial TCA cycle (obligate autotrophs) | 7 / 8 |
| superpathway of NAD/NADP - NADH/NADPH interconversion (yeast) | 7 / 8 |
| superpathway of guanosine nucleotides de novo biosynthesis II | 7 / 8 |
| 2-amino-3-carboxymuconate semialdehyde degradation to 2-hydroxypentadienoate | 4 / 4 |
| trans-4-hydroxy-L-proline degradation II | 4 / 4 |
| CDP-diacylglycerol biosynthesis I | 4 / 4 |
| CDP-diacylglycerol biosynthesis II | 4 / 4 |
| GDP-mannose biosynthesis | 4 / 4 |
| L-asparagine biosynthesis III (tRNA-dependent) | 4 / 4 |
| L-histidine degradation I | 4 / 4 |
| L-methionine biosynthesis III | 4 / 4 |
| L-proline biosynthesis I (from L-glutamate) | 4 / 4 |
| L-valine biosynthesis | 4 / 4 |
| NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde | 4 / 4 |
| assimilatory sulfate reduction I | 4 / 4 |
| biotin biosynthesis from 8-amino-7-oxononanoate I | 4 / 4 |
| biotin-carboxyl carrier protein assembly | 4 / 4 |
| catechol degradation to β-ketoadipate | 4 / 4 |
| chlorinated phenols degradation | 4 / 4 |
| coenzyme A biosynthesis I (bacteria) | 4 / 4 |
| coenzyme A biosynthesis II (eukaryotic) | 4 / 4 |
| formaldehyde oxidation VII (THF pathway) | 4 / 4 |
| gentisate degradation II | 4 / 4 |
| gondoate biosynthesis (anaerobic) | 4 / 4 |
| guanosine ribonucleotides de novo biosynthesis | 4 / 4 |
| phosphopantothenate biosynthesis I | 4 / 4 |
| protocatechuate degradation II (ortho-cleavage pathway) | 4 / 4 |
| pyrimidine deoxyribonucleotide phosphorylation | 4 / 4 |
| pyruvate fermentation to acetate and (S)-lactate I | 4 / 4 |
| reactive oxygen species degradation | 4 / 4 |
| superpathway of L-alanine biosynthesis | 4 / 4 |
| superpathway of L-serine and glycine biosynthesis I | 4 / 4 |
| superpathway of pyrimidine nucleobases salvage | 4 / 4 |
| 8-amino-7-oxononanoate biosynthesis I | 9 / 11 |
| superpathway of phenylethylamine degradation | 9 / 11 |
| superpathway of thiamine diphosphate biosynthesis II | 9 / 11 |
| 2-nitrobenzoate degradation I | 6 / 7 |
| 3-methylbutanol biosynthesis (engineered) | 6 / 7 |
| L-lysine biosynthesis III | 6 / 7 |
| L-lysine biosynthesis VI | 6 / 7 |
| NAD salvage pathway I (PNC VI cycle) | 6 / 7 |
| benzoyl-CoA degradation I (aerobic) | 6 / 7 |
| catechol degradation II (meta-cleavage pathway) | 6 / 7 |
| ethene biosynthesis III (microbes) | 6 / 7 |
| pyridoxal 5'-phosphate biosynthesis I | 6 / 7 |
| pyrimidine deoxyribonucleotides de novo biosynthesis IV | 6 / 7 |
| superpathway of adenosine nucleotides de novo biosynthesis II | 6 / 7 |
| toluene degradation I (aerobic) (via o-cresol) | 6 / 7 |
| superpathway of NAD biosynthesis in eukaryotes | 11 / 14 |
| superpathway of glyoxylate cycle and fatty acid degradation | 11 / 14 |
| 2-aminoethylphosphonate biosynthesis | 3 / 3 |
| 2-hydroxypenta-2,4-dienoate degradation | 3 / 3 |
| 2-methyladeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| 2-oxoglutarate decarboxylation to succinyl-CoA | 3 / 3 |
| 2-oxoisovalerate decarboxylation to isobutanoyl-CoA | 3 / 3 |
| 5-hydroxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| 5-methoxy-6-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| 5-methoxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| 5-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| S-adenosyl-L-methionine salvage II | 3 / 3 |
| CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis | 3 / 3 |
| D-galactarate degradation II | 3 / 3 |
| D-glucarate degradation II | 3 / 3 |
| D-serine degradation | 3 / 3 |
| GDP-L-fucose biosynthesis I (from GDP-D-mannose) | 3 / 3 |
| L-citrulline degradation | 3 / 3 |
| L-homoserine biosynthesis | 3 / 3 |
| L-idonate degradation | 3 / 3 |
| L-isoleucine biosynthesis V | 3 / 3 |
| L-lyxonate degradation | 3 / 3 |
| L-phenylalanine biosynthesis I | 3 / 3 |
| L-proline degradation I | 3 / 3 |
| L-serine biosynthesis I | 3 / 3 |
| L-serine degradation | 3 / 3 |
| L-tryptophan degradation I (via anthranilate) | 3 / 3 |
| L-tyrosine biosynthesis I | 3 / 3 |
| UTP and CTP de novo biosynthesis | 3 / 3 |
| acetone degradation I (to methylglyoxal) | 3 / 3 |
| adeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| adenosine ribonucleotides de novo biosynthesis | 3 / 3 |
| adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I | 3 / 3 |
| aerobic respiration III (alternative oxidase pathway) | 3 / 3 |
| ammonia assimilation cycle III | 3 / 3 |
| assimilatory sulfate reduction III | 3 / 3 |
| benzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| benzoyl-CoA biosynthesis | 3 / 3 |
| cardiolipin biosynthesis II | 3 / 3 |
| choline-O-sulfate degradation | 3 / 3 |
| cyanate degradation | 3 / 3 |
| dTMP de novo biosynthesis (mitochondrial) | 3 / 3 |
| ethanol degradation II | 3 / 3 |
| ethanol degradation IV | 3 / 3 |
| fatty acid biosynthesis initiation (type II) | 3 / 3 |
| formaldehyde oxidation II (glutathione-dependent) | 3 / 3 |
| gentisate degradation I | 3 / 3 |
| glycine biosynthesis II | 3 / 3 |
| glycine cleavage | 3 / 3 |
| glycine degradation | 3 / 3 |
| ketolysis | 3 / 3 |
| malonate degradation I (biotin-independent) | 3 / 3 |
| methylglyoxal degradation VIII | 3 / 3 |
| molybdenum cofactor biosynthesis | 3 / 3 |
| pentose phosphate pathway (oxidative branch) I | 3 / 3 |
| pentose phosphate pathway (partial) | 3 / 3 |
| polyhydroxybutanoate biosynthesis | 3 / 3 |
| pyruvate decarboxylation to acetyl CoA I | 3 / 3 |
| pyruvate fermentation to (S)-acetoin | 3 / 3 |
| pyruvate fermentation to acetate II | 3 / 3 |
| superpathway of acetate utilization and formation | 3 / 3 |
| superpathway of acrylonitrile degradation | 3 / 3 |
| superpathway of ammonia assimilation (plants) | 3 / 3 |
| tetrahydrofolate biosynthesis I | 3 / 3 |
| urea degradation I | 3 / 3 |
| Rubisco shunt | 8 / 10 |
| tRNA processing | 8 / 10 |
| superpathway of (Kdo)2-lipid A biosynthesis | 13 / 17 |
| β-alanine biosynthesis II | 5 / 6 |
| γ-glutamyl cycle | 5 / 6 |
| (5Z)-dodecenoate biosynthesis I | 5 / 6 |
| 2-methylcitrate cycle II | 5 / 6 |
| 5-oxo-L-proline metabolism | 5 / 6 |
| CMP-pseudaminate biosynthesis | 5 / 6 |
| L-isoleucine biosynthesis IV | 5 / 6 |
| L-leucine degradation I | 5 / 6 |
| L-methionine biosynthesis II | 5 / 6 |
| L-threonine degradation I | 5 / 6 |
| NAD de novo biosynthesis IV (anaerobic) | 5 / 6 |
| UMP biosynthesis III | 5 / 6 |
| adenosylcobinamide-GDP salvage from cobinamide II | 5 / 6 |
| biotin biosynthesis II | 5 / 6 |
| cyanophycin metabolism | 5 / 6 |
| fatty acid salvage | 5 / 6 |
| inosine-5'-phosphate biosynthesis III | 5 / 6 |
| lipid IVA biosynthesis (2,3-diamino-2,3-dideoxy-D-glucopyranose-containing) | 5 / 6 |
| pentose phosphate pathway (non-oxidative branch) II | 5 / 6 |
| stearate biosynthesis II (bacteria and plants) | 5 / 6 |
| superpathway of allantoin degradation in yeast | 5 / 6 |
| formaldehyde assimilation I (serine pathway) | 10 / 13 |
| taxadiene biosynthesis (engineered) | 10 / 13 |
| β-alanine degradation II | 2 / 2 |
| 3-dehydroquinate biosynthesis I | 2 / 2 |
| 3-oxoadipate degradation | 2 / 2 |
| 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis I | 2 / 2 |
| 4-aminobenzoate biosynthesis I | 2 / 2 |
| 4-aminobutanoate degradation III | 2 / 2 |
| 8-amino-7-oxononanoate biosynthesis III | 2 / 2 |
| trans, trans-farnesyl diphosphate biosynthesis | 2 / 2 |
| CMP phosphorylation | 2 / 2 |
| CO2 fixation into oxaloacetate (anaplerotic) | 2 / 2 |
| D-galacturonate degradation III | 2 / 2 |
| D-glucuronate degradation III | 2 / 2 |
| Entner-Doudoroff shunt | 2 / 2 |
| Kdo transfer to lipid IVA (Brucella) | 2 / 2 |
| Kdo transfer to lipid IVA (E. coli) | 2 / 2 |
| Kdo transfer to lipid IVA (H. pylori) | 2 / 2 |
| Kdo transfer to lipid IVA (P. gingivalis) | 2 / 2 |
| Kdo transfer to lipid IVA (P. putida) | 2 / 2 |
| Kdo transfer to lipid IVA (generic) | 2 / 2 |
| L-alanine biosynthesis I | 2 / 2 |
| L-alanine degradation I | 2 / 2 |
| L-arginine degradation III (arginine decarboxylase/agmatinase pathway) | 2 / 2 |
| L-cysteine biosynthesis I | 2 / 2 |
| L-glutamate biosynthesis I | 2 / 2 |
| L-glutamate degradation II | 2 / 2 |
| L-homocysteine biosynthesis | 2 / 2 |
| L-phenylalanine biosynthesis III (cytosolic, plants) | 2 / 2 |
| L-threonine biosynthesis | 2 / 2 |
| L-threonine degradation II | 2 / 2 |
| L-threonine degradation IV | 2 / 2 |
| N-end rule pathway I (prokaryotic) | 2 / 2 |
| NADH to cytochrome bo oxidase electron transfer I | 2 / 2 |
| NADH to cytochrome bo oxidase electron transfer II | 2 / 2 |
| UDP-α-D-glucose biosynthesis | 2 / 2 |
| UDP-α-D-xylose biosynthesis | 2 / 2 |
| acetate and ATP formation from acetyl-CoA I | 2 / 2 |
| acetoacetate degradation (to acetyl CoA) | 2 / 2 |
| acrylonitrile degradation I | 2 / 2 |
| adenosine deoxyribonucleotides de novo biosynthesis I | 2 / 2 |
| alkylnitronates degradation | 2 / 2 |
| ammonia assimilation cycle I | 2 / 2 |
| ammonia assimilation cycle II | 2 / 2 |
| anthranilate degradation II (aerobic) | 2 / 2 |
| arsenate detoxification III | 2 / 2 |
| arsenite to oxygen electron transfer | 2 / 2 |
| benzoate degradation I (aerobic) | 2 / 2 |
| betaxanthin biosynthesis (via dopamine) | 2 / 2 |
| bis(guanylyl molybdenum cofactor) biosynthesis | 2 / 2 |
| catechol degradation to 2-hydroxypentadienoate I | 2 / 2 |
| choline degradation I | 2 / 2 |
| citrate degradation | 2 / 2 |
| cyclohexane-1-carboxylate degradation (anaerobic) | 2 / 2 |
| di-trans,poly-cis-undecaprenyl phosphate biosynthesis | 2 / 2 |
| ethanol degradation I | 2 / 2 |
| flavin salvage | 2 / 2 |
| fructose 2,6-bisphosphate biosynthesis | 2 / 2 |
| glutathione biosynthesis | 2 / 2 |
| glutathione degradation (DUG pathway) | 2 / 2 |
| glycerol-3-phosphate shuttle | 2 / 2 |
| glycerol-3-phosphate to cytochrome bo oxidase electron transfer | 2 / 2 |
| glycerophosphodiester degradation | 2 / 2 |
| glycine betaine biosynthesis I (Gram-negative bacteria) | 2 / 2 |
| glycine betaine biosynthesis II (Gram-positive bacteria) | 2 / 2 |
| glycolate and glyoxylate degradation II | 2 / 2 |
| guanosine deoxyribonucleotides de novo biosynthesis I | 2 / 2 |
| homotaurine degradation | 2 / 2 |
| hydroxymethylpyrimidine salvage | 2 / 2 |
| indole-3-acetate biosynthesis IV (bacteria) | 2 / 2 |
| lipoate biosynthesis and incorporation I | 2 / 2 |
| malate/L-aspartate shuttle pathway | 2 / 2 |
| malonate decarboxylase activation | 2 / 2 |
| mercaptosuccinate degradation | 2 / 2 |
| methylsalicylate degradation | 2 / 2 |
| nitrate reduction IX (dissimilatory) | 2 / 2 |
| oleate biosynthesis II (animals and fungi) | 2 / 2 |
| palmitoleate biosynthesis IV (fungi and animals) | 2 / 2 |
| phenylethylamine degradation I | 2 / 2 |
| phosphatidylserine and phosphatidylethanolamine biosynthesis I | 2 / 2 |
| polyphosphate metabolism | 2 / 2 |
| proline to cytochrome bo oxidase electron transfer | 2 / 2 |
| putrescine biosynthesis I | 2 / 2 |
| pyrimidine nucleobases salvage II | 2 / 2 |
| spermidine biosynthesis I | 2 / 2 |
| succinate to cytochrome bo oxidase electron transfer | 2 / 2 |
| sulfate activation for sulfonation | 2 / 2 |
| sulfoacetaldehyde degradation I | 2 / 2 |
| superoxide radicals degradation | 2 / 2 |
| tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate | 2 / 2 |
| thiamine diphosphate biosynthesis I (E. coli) | 2 / 2 |
| thiamine diphosphate biosynthesis II (Bacillus) | 2 / 2 |
| trehalose biosynthesis I | 2 / 2 |
| trehalose degradation II (cytosolic) | 2 / 2 |
| trehalose degradation VI (periplasmic) | 2 / 2 |
| two-component alkanesulfonate monooxygenase | 2 / 2 |
| vanillin and vanillate degradation II | 2 / 2 |
| L-lysine biosynthesis II | 7 / 9 |
| TCA cycle IV (2-oxoglutarate decarboxylase) | 7 / 9 |
| flavin biosynthesis III (fungi) | 7 / 9 |
| methylerythritol phosphate pathway I | 7 / 9 |
| phenylacetate degradation I (aerobic) | 7 / 9 |
| sucrose biosynthesis I (from photosynthesis) | 7 / 9 |
| superpathway of S-adenosyl-L-methionine biosynthesis | 7 / 9 |
| superpathway of L-methionine biosynthesis (transsulfuration) | 7 / 9 |
| mixed acid fermentation | 12 / 16 |
| (S)-propane-1,2-diol degradation | 4 / 5 |
| 4-hydroxybenzoate biosynthesis III (plants) | 4 / 5 |
| 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I | 4 / 5 |
| 8-amino-7-oxononanoate biosynthesis IV | 4 / 5 |
| CMP-3-deoxy-D-manno-octulosonate biosynthesis | 4 / 5 |
| D-glucuronate degradation II | 4 / 5 |
| L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde | 4 / 5 |
| NAD salvage pathway V (PNC V cycle) | 4 / 5 |
| acetylene degradation (anaerobic) | 4 / 5 |
| adenosine nucleotides degradation II | 4 / 5 |
| cytosolic NADPH production (yeast) | 4 / 5 |
| folate polyglutamylation | 4 / 5 |
| glucose degradation (oxidative) | 4 / 5 |
| ketogenesis | 4 / 5 |
| mitochondrial NADPH production (yeast) | 4 / 5 |
| octane oxidation | 4 / 5 |
| pyruvate fermentation to isobutanol (engineered) | 4 / 5 |
| sucrose degradation II (sucrose synthase) | 4 / 5 |
| superpathway of D-glucarate and D-galactarate degradation | 4 / 5 |
| superpathway of fatty acid biosynthesis initiation | 4 / 5 |
| thiamine diphosphate salvage II | 4 / 5 |
| octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) | 9 / 12 |
| methylaspartate cycle | 14 / 19 |
| adenosylcobalamin biosynthesis II (aerobic) | 24 / 33 |
| (R,R)-butanediol biosynthesis | 1 / 1 |
| (S,S)-butanediol biosynthesis | 1 / 1 |
| (R,R)-butanediol degradation | 1 / 1 |
| (S,S)-butanediol degradation | 1 / 1 |
| 3-(4-hydroxyphenyl)pyruvate biosynthesis | 1 / 1 |
| 4-hydroxybenzoate biosynthesis II (bacteria) | 1 / 1 |
| S-methyl-5'-thioadenosine degradation IV | 1 / 1 |
| bis(guanylyl tungstenpterin) cofactor biosynthesis | 1 / 1 |
| cis-cyclopropane fatty acid (CFA) biosynthesis | 1 / 1 |
| ATP biosynthesis | 1 / 1 |
| D-alanine degradation | 1 / 1 |
| D-gluconate degradation | 1 / 1 |
| D-malate degradation | 1 / 1 |
| L-alanine biosynthesis II | 1 / 1 |
| L-alanine biosynthesis III | 1 / 1 |
| L-alanine degradation III | 1 / 1 |
| L-alanine degradation IV | 1 / 1 |
| L-asparagine degradation I | 1 / 1 |
| L-aspartate biosynthesis | 1 / 1 |
| L-aspartate degradation I | 1 / 1 |
| L-cysteine degradation IV | 1 / 1 |
| L-glutamate biosynthesis II | 1 / 1 |
| L-glutamate biosynthesis III | 1 / 1 |
| L-glutamate biosynthesis IV | 1 / 1 |
| L-glutamate biosynthesis V | 1 / 1 |
| L-glutamate degradation I | 1 / 1 |
| L-glutamate degradation IX (via 4-aminobutanoate) | 1 / 1 |
| L-glutamate degradation X | 1 / 1 |
| L-glutamine biosynthesis I | 1 / 1 |
| L-glutamine degradation I | 1 / 1 |
| L-glutamine degradation II | 1 / 1 |
| L-malate degradation I | 1 / 1 |
| L-ornithine degradation I (L-proline biosynthesis) | 1 / 1 |
| L-phenylalanine degradation I (aerobic) | 1 / 1 |
| L-tyrosine biosynthesis IV | 1 / 1 |
| NADP biosynthesis | 1 / 1 |
| PRPP biosynthesis | 1 / 1 |
| S-adenosyl-L-methionine biosynthesis | 1 / 1 |
| UDP-α-D-galactose biosynthesis | 1 / 1 |
| UDP-α-D-glucuronate biosynthesis (from UDP-glucose) | 1 / 1 |
| UDP-N-acetyl-D-galactosamine biosynthesis I | 1 / 1 |
| acetaldehyde biosynthesis I | 1 / 1 |
| acetate and ATP formation from acetyl-CoA II | 1 / 1 |
| acetate and ATP formation from acetyl-CoA III | 1 / 1 |
| acetate conversion to acetyl-CoA | 1 / 1 |
| acetone degradation II (to acetoacetate) | 1 / 1 |
| acrylonitrile degradation II | 1 / 1 |
| acyl carrier protein activation | 1 / 1 |
| acyl-CoA hydrolysis | 1 / 1 |
| adenine and adenosine salvage VI | 1 / 1 |
| adenosine nucleotides degradation III | 1 / 1 |
| alanine racemization | 1 / 1 |
| arginine dependent acid resistance | 1 / 1 |
| benzoate degradation II (aerobic and anaerobic) | 1 / 1 |
| betanidin degradation | 1 / 1 |
| cadaverine biosynthesis | 1 / 1 |
| carbon monoxide oxidation to CO2 | 1 / 1 |
| cellulose biosynthesis | 1 / 1 |
| fatty acid β-oxidation III (unsaturated, odd number) | 1 / 1 |
| fluoroacetate degradation | 1 / 1 |
| formate oxidation to CO2 | 1 / 1 |
| geranyl diphosphate biosynthesis | 1 / 1 |
| geranylgeranyl diphosphate biosynthesis | 1 / 1 |
| glutathionylspermidine biosynthesis | 1 / 1 |
| glycine biosynthesis I | 1 / 1 |
| glycine biosynthesis III | 1 / 1 |
| glycine biosynthesis IV | 1 / 1 |
| glyphosate degradation II | 1 / 1 |
| guanylyl molybdenum cofactor biosynthesis | 1 / 1 |
| homospermidine biosynthesis I | 1 / 1 |
| homospermidine biosynthesis II | 1 / 1 |
| indole-3-acetate biosynthesis V (bacteria and fungi) | 1 / 1 |
| lactose degradation III | 1 / 1 |
| long-chain fatty acid activation | 1 / 1 |
| menaquinol-4 biosynthesis I | 1 / 1 |
| menaquinol-6 biosynthesis | 1 / 1 |
| menaquinol-8 biosynthesis | 1 / 1 |
| menaquinol-9 biosynthesis | 1 / 1 |
| methylglyoxal degradation IX | 1 / 1 |
| octaprenyl diphosphate biosynthesis | 1 / 1 |
| phenol degradation I (aerobic) | 1 / 1 |
| phosphate acquisition | 1 / 1 |
| phosphonoacetate degradation | 1 / 1 |
| pyrimidine nucleobases salvage I | 1 / 1 |
| pyruvate fermentation to (S)-lactate | 1 / 1 |
| salicylate degradation I | 1 / 1 |
| salicylate degradation II | 1 / 1 |
| sulfite oxidation I | 1 / 1 |
| taurine degradation IV | 1 / 1 |
| thiosulfate disproportionation IV (rhodanese) | 1 / 1 |
| thiosulfate oxidation I (to tetrathionate) | 1 / 1 |
| urea degradation II | 1 / 1 |
| 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation | 6 / 8 |
| L-citrulline biosynthesis | 6 / 8 |
| L-isoleucine biosynthesis II | 6 / 8 |
| L-valine degradation I | 6 / 8 |
| UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing) | 6 / 8 |
| ketogluconate metabolism | 6 / 8 |
| pyrimidine deoxyribonucleotides biosynthesis from CTP | 6 / 8 |
| superpathway of L-homoserine and L-methionine biosynthesis | 6 / 8 |
| superpathway of heme b biosynthesis from glycine | 6 / 8 |
| superpathway of polyamine biosynthesis I | 6 / 8 |
| ubiquinol-8 biosynthesis (early decarboxylation) | 6 / 8 |
| peptidoglycan biosynthesis III (mycobacteria) | 11 / 15 |
| palmitate biosynthesis III | 21 / 29 |
| 1,2-dichloroethane degradation | 3 / 4 |
| 2-aminophenol degradation | 3 / 4 |
| 3-chlorocatechol degradation III (meta pathway) | 3 / 4 |
| 4-hydroxy-3-prenylbenzoate biosynthesis | 3 / 4 |
| D-glucarate degradation I | 3 / 4 |
| S-adenosyl-L-methionine salvage I | 3 / 4 |
| D-erythronate degradation II | 3 / 4 |
| D-fructuronate degradation | 3 / 4 |
| D-galactarate degradation I | 3 / 4 |
| GABA shunt I | 3 / 4 |
| GABA shunt II | 3 / 4 |
| L-arginine degradation V (arginine deiminase pathway) | 3 / 4 |
| L-cysteine biosynthesis VII (from S-sulfo-L-cysteine) | 3 / 4 |
| L-serine biosynthesis II | 3 / 4 |
| L-threonate degradation | 3 / 4 |
| L-tryptophan degradation X (mammalian, via tryptamine) | 3 / 4 |
| L-tyrosine biosynthesis II | 3 / 4 |
| L-tyrosine biosynthesis III | 3 / 4 |
| adenosine deoxyribonucleotides de novo biosynthesis II | 3 / 4 |
| aerobic respiration I (cytochrome c) | 3 / 4 |
| aerobic respiration II (cytochrome c) (yeast) | 3 / 4 |
| assimilatory sulfate reduction IV | 3 / 4 |
| biotin biosynthesis from 8-amino-7-oxononanoate II | 3 / 4 |
| cardiolipin and phosphatidylethanolamine biosynthesis (Xanthomonas) | 3 / 4 |
| catechol degradation to 2-hydroxypentadienoate II | 3 / 4 |
| coenzyme A biosynthesis III (archaea) | 3 / 4 |
| dipicolinate biosynthesis | 3 / 4 |
| dipyrromethane cofactor biosynthesis | 3 / 4 |
| gallate degradation I | 3 / 4 |
| glutaminyl-tRNAgln biosynthesis via transamidation | 3 / 4 |
| glycerol and glycerophosphodiester degradation | 3 / 4 |
| glycolate and glyoxylate degradation I | 3 / 4 |
| guanosine deoxyribonucleotides de novo biosynthesis II | 3 / 4 |
| guanosine nucleotides degradation II | 3 / 4 |
| guanosine nucleotides degradation III | 3 / 4 |
| heme b biosynthesis I (aerobic) | 3 / 4 |
| heme b biosynthesis II (oxygen-independent) | 3 / 4 |
| heme b biosynthesis V (aerobic) | 3 / 4 |
| inosine 5'-phosphate degradation | 3 / 4 |
| phytol degradation | 3 / 4 |
| preQ0 biosynthesis | 3 / 4 |
| pyruvate fermentation to acetate and lactate II | 3 / 4 |
| queuosine biosynthesis I (de novo) | 3 / 4 |
| salidroside biosynthesis | 3 / 4 |
| siroheme biosynthesis | 3 / 4 |
| sucrose degradation III (sucrose invertase) | 3 / 4 |
| sucrose degradation IV (sucrose phosphorylase) | 3 / 4 |
| superpathway of L-aspartate and L-asparagine biosynthesis | 3 / 4 |
| superpathway of putrescine biosynthesis | 3 / 4 |
| tetrapyrrole biosynthesis II (from glycine) | 3 / 4 |
| toluene degradation to 2-hydroxypentadienoate I (via o-cresol) | 3 / 4 |
| glycolysis VI (from fructose) | 8 / 11 |
| purine nucleotides degradation II (aerobic) | 8 / 11 |
| 4-methylcatechol degradation (ortho cleavage) | 5 / 7 |
| UTP and CTP dephosphorylation I | 5 / 7 |
| acetyl-CoA fermentation to butanoate | 5 / 7 |
| drosopterin and aurodrosopterin biosynthesis | 5 / 7 |
| fatty acid β-oxidation I (generic) | 5 / 7 |
| pyrimidine deoxyribonucleotides de novo biosynthesis II | 5 / 7 |
| superpathway of glycol metabolism and degradation | 5 / 7 |
| thiazole component of thiamine diphosphate biosynthesis II | 5 / 7 |
| ureide biosynthesis | 5 / 7 |
| 2-methyl-branched fatty acid β-oxidation | 10 / 14 |
| peptidoglycan recycling I | 10 / 14 |
| superpathway of aromatic compound degradation via 3-oxoadipate | 25 / 35 |
| β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation | 2 / 3 |
| (R)-cysteate degradation | 2 / 3 |
| 2-aminoethylphosphonate degradation I | 2 / 3 |
| 2-chloroacrylate degradation I | 2 / 3 |
| 4-methylphenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 2 / 3 |
| 4-toluenecarboxylate degradation | 2 / 3 |
| 5,6-dimethylbenzimidazole biosynthesis I (aerobic) | 2 / 3 |
| 6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium) | 2 / 3 |
| D-sorbitol degradation I | 2 / 3 |
| GDP-α-D-glucose biosynthesis | 2 / 3 |
| L-alanine degradation II (to D-lactate) | 2 / 3 |
| L-arginine degradation X (arginine monooxygenase pathway) | 2 / 3 |
| L-asparagine degradation III (mammalian) | 2 / 3 |
| L-aspartate degradation II (aerobic) | 2 / 3 |
| L-aspartate degradation III (anaerobic) | 2 / 3 |
| L-carnitine degradation II | 2 / 3 |
| L-cysteine biosynthesis IX (Trichomonas vaginalis) | 2 / 3 |
| L-cysteine degradation I | 2 / 3 |
| L-cysteine degradation II | 2 / 3 |
| L-isoleucine degradation II | 2 / 3 |
| L-isoleucine degradation III (oxidative Stickland reaction) | 2 / 3 |
| L-leucine degradation III | 2 / 3 |
| L-leucine degradation V (oxidative Stickland reaction) | 2 / 3 |
| L-methionine degradation I (to L-homocysteine) | 2 / 3 |
| L-methionine degradation II | 2 / 3 |
| L-ornithine biosynthesis II | 2 / 3 |
| L-phenylalanine degradation II (anaerobic) | 2 / 3 |
| L-phenylalanine degradation V | 2 / 3 |
| L-proline biosynthesis III (from L-ornithine) | 2 / 3 |
| L-selenocysteine biosynthesis I (bacteria) | 2 / 3 |
| L-threonine degradation III (to methylglyoxal) | 2 / 3 |
| L-tryptophan degradation II (via pyruvate) | 2 / 3 |
| L-tryptophan degradation VI (via tryptamine) | 2 / 3 |
| L-valine degradation II | 2 / 3 |
| L-valine degradation III (oxidative Stickland reaction) | 2 / 3 |
| NAD salvage pathway III (to nicotinamide riboside) | 2 / 3 |
| acrylate degradation II | 2 / 3 |
| adenine salvage | 2 / 3 |
| aldoxime degradation | 2 / 3 |
| allantoin degradation to glyoxylate I | 2 / 3 |
| aminopropylcadaverine biosynthesis | 2 / 3 |
| arsenite to oxygen electron transfer (via azurin) | 2 / 3 |
| betaxanthin biosynthesis | 2 / 3 |
| cardiolipin biosynthesis I | 2 / 3 |
| cardiolipin biosynthesis III | 2 / 3 |
| cellulose degradation II (fungi) | 2 / 3 |
| epoxysqualene biosynthesis | 2 / 3 |
| ethanol degradation III | 2 / 3 |
| formate assimilation into 5,10-methylenetetrahydrofolate | 2 / 3 |
| gallate biosynthesis | 2 / 3 |
| glutathione-peroxide redox reactions | 2 / 3 |
| glycerol degradation I | 2 / 3 |
| glycine betaine biosynthesis III (plants) | 2 / 3 |
| hypotaurine degradation | 2 / 3 |
| lipoate biosynthesis and incorporation III (Bacillus) | 2 / 3 |
| lipoate biosynthesis and incorporation V (mammals) | 2 / 3 |
| methylglyoxal degradation I | 2 / 3 |
| neolinustatin bioactivation | 2 / 3 |
| nitric oxide biosynthesis II (mammals) | 2 / 3 |
| oleate biosynthesis III (cyanobacteria) | 2 / 3 |
| ophthalmate biosynthesis | 2 / 3 |
| phenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 2 / 3 |
| propanoyl CoA degradation I | 2 / 3 |
| putrescine degradation IV | 2 / 3 |
| pyrimidine deoxyribonucleosides degradation | 2 / 3 |
| pyruvate fermentation to (R)-acetoin I | 2 / 3 |
| pyruvate fermentation to acetate I | 2 / 3 |
| pyruvate fermentation to acetate IV | 2 / 3 |
| pyruvate fermentation to acetate V | 2 / 3 |
| pyruvate fermentation to acetate VII | 2 / 3 |
| pyruvate fermentation to acetate and alanine | 2 / 3 |
| pyruvate fermentation to ethanol I | 2 / 3 |
| pyruvate fermentation to ethanol III | 2 / 3 |
| resorcinol degradation | 2 / 3 |
| sorbitol biosynthesis II | 2 / 3 |
| sulfoacetaldehyde degradation IV | 2 / 3 |
| sulfolactate degradation I | 2 / 3 |
| tetrahydrofolate biosynthesis II | 2 / 3 |
| thiamine diphosphate salvage V | 2 / 3 |
| thymine degradation | 2 / 3 |
| trehalose degradation V | 2 / 3 |
| umbelliferone biosynthesis | 2 / 3 |
| uracil degradation I (reductive) | 2 / 3 |
| urate conversion to allantoin I | 2 / 3 |
| L-glutamate degradation V (via hydroxyglutarate) | 7 / 10 |
| glycolysis IV | 7 / 10 |
| glycolysis V (Pyrococcus) | 7 / 10 |
| isoprene biosynthesis I | 7 / 10 |
| peptidoglycan recycling II | 7 / 10 |
| superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) | 7 / 10 |
| superpathway of thiamine diphosphate biosynthesis I | 7 / 10 |
| peptidoglycan biosynthesis II (staphylococci) | 12 / 17 |
| peptidoglycan biosynthesis IV (Enterococcus faecium) | 12 / 17 |
| superpathway of anaerobic energy metabolism (invertebrates) | 12 / 17 |
| (5Z)-dodecenoate biosynthesis II | 4 / 6 |
| L-arabinose degradation III | 4 / 6 |
| L-histidine degradation III | 4 / 6 |
| L-isoleucine degradation I | 4 / 6 |
| L-lysine degradation X | 4 / 6 |
| UDP-N-acetyl-D-glucosamine biosynthesis II | 4 / 6 |
| arsenate detoxification I | 4 / 6 |
| autoinducer AI-2 biosynthesis II (Vibrio) | 4 / 6 |
| methylgallate degradation | 4 / 6 |
| molybdopterin biosynthesis | 4 / 6 |
| propanoate fermentation to 2-methylbutanoate | 4 / 6 |
| pyruvate fermentation to butanol II (engineered) | 4 / 6 |
| stearate biosynthesis IV | 4 / 6 |
| superpathway of 2,3-butanediol biosynthesis | 4 / 6 |
| superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis | 4 / 6 |
| superpathway of heme b biosynthesis from uroporphyrinogen-III | 4 / 6 |
| Calvin-Benson-Bassham cycle | 9 / 13 |
| folate transformations I | 9 / 13 |
| superpathway of cardiolipin biosynthesis (bacteria) | 9 / 13 |
| toluene degradation IV (aerobic) (via catechol) | 9 / 13 |
| anteiso-branched-chain fatty acid biosynthesis | 24 / 34 |
| even iso-branched-chain fatty acid biosynthesis | 24 / 34 |
| odd iso-branched-chain fatty acid biosynthesis | 24 / 34 |
| β-alanine biosynthesis I | 1 / 2 |
| β-alanine biosynthesis IV | 1 / 2 |
| β-alanine degradation I | 1 / 2 |
| β-alanine degradation III | 1 / 2 |
| γ-linolenate biosynthesis II (animals) | 1 / 2 |
| (2-trimethylamino)ethylphosphonate degradation | 1 / 2 |
| (3R)-linalool biosynthesis | 1 / 2 |
| (3S)-linalool biosynthesis | 1 / 2 |
| (Kdo)2-lipid A biosynthesis (E. coli) | 1 / 2 |
| 2-aminoethylphosphonate degradation II | 1 / 2 |
| 2-oxobutanoate degradation II | 1 / 2 |
| 4-aminobenzoate biosynthesis II | 1 / 2 |
| 4-aminobutanoate degradation I | 1 / 2 |
| 4-aminobutanoate degradation II | 1 / 2 |
| 4-hydroxy-4-methyl-L-glutamate biosynthesis | 1 / 2 |
| 4-nitrobenzoate degradation | 1 / 2 |
| 8-amino-7-oxononanoate biosynthesis II | 1 / 2 |
| S-methyl-5'-thioadenosine degradation I | 1 / 2 |
| myo-inositol biosynthesis | 1 / 2 |
| D-lactate to cytochrome bo oxidase electron transfer | 1 / 2 |
| D-mannose degradation I | 1 / 2 |
| D-mannose degradation II | 1 / 2 |
| GDP-6-deoxy-D-talose biosynthesis | 1 / 2 |
| GDP-D-perosamine biosynthesis | 1 / 2 |
| GDP-D-rhamnose biosynthesis | 1 / 2 |
| Kdo transfer to lipid IVA (Haemophilus) | 1 / 2 |
| Kdo transfer to lipid IVA (Vibrio cholerae serogroup O1 El Tor) | 1 / 2 |
| L-alanine degradation V (oxidative Stickland reaction) | 1 / 2 |
| L-arginine degradation VII (arginase 3 pathway) | 1 / 2 |
| L-cysteine degradation III | 1 / 2 |
| L-dopa degradation II (bacterial) | 1 / 2 |
| L-histidine degradation V | 1 / 2 |
| L-lactaldehyde degradation (aerobic) | 1 / 2 |
| L-proline biosynthesis II (from arginine) | 1 / 2 |
| L-threonine degradation V | 1 / 2 |
| L-tryptophan degradation IV (via indole-3-lactate) | 1 / 2 |
| L-tyrosine degradation II | 1 / 2 |
| N6-L-threonylcarbamoyladenosine37-modified tRNA biosynthesis | 1 / 2 |
| NAD biosynthesis from nicotinamide | 1 / 2 |
| NAD phosphorylation and transhydrogenation | 1 / 2 |
| NAD salvage pathway IV (from nicotinamide riboside) | 1 / 2 |
| NADH to cytochrome bd oxidase electron transfer I | 1 / 2 |
| NADH to cytochrome bd oxidase electron transfer II | 1 / 2 |
| NADH to dimethyl sulfoxide electron transfer | 1 / 2 |
| NADH to nitrate electron transfer | 1 / 2 |
| UDP-α-D-galactofuranose biosynthesis | 1 / 2 |
| UDP-2-acetamido-4-amino-2,4,6-trideoxy-α-D-galactose biosynthesis | 1 / 2 |
| acetone degradation III (to propane-1,2-diol) | 1 / 2 |
| acyl carrier protein metabolism | 1 / 2 |
| adenine and adenosine salvage I | 1 / 2 |
| adenine and adenosine salvage II | 1 / 2 |
| adenosylcobinamide-GDP salvage from assorted adenosylcobamides | 1 / 2 |
| allantoin degradation to ureidoglycolate I (urea producing) | 1 / 2 |
| aminopropanol phosphate biosynthesis I | 1 / 2 |
| anthranilate degradation III (anaerobic) | 1 / 2 |
| atromentin biosynthesis | 1 / 2 |
| baicalein degradation (hydrogen peroxide detoxification) | 1 / 2 |
| cyanide detoxification II | 1 / 2 |
| cytidylyl molybdenum cofactor sulfurylation | 1 / 2 |
| diethylphosphate degradation | 1 / 2 |
| diploterol biosynthesis | 1 / 2 |
| ethylene glycol degradation | 1 / 2 |
| formate to dimethyl sulfoxide electron transfer | 1 / 2 |
| glycerol 3-phosphate to cytochrome aa3 oxidase electron transfer | 1 / 2 |
| glycerol-3-phosphate to fumarate electron transfer | 1 / 2 |
| glycerol-3-phosphate to hydrogen peroxide electron transport | 1 / 2 |
| glycine degradation (reductive Stickland reaction) | 1 / 2 |
| guanine and guanosine salvage I | 1 / 2 |
| guanine and guanosine salvage II | 1 / 2 |
| homoglutathione biosynthesis | 1 / 2 |
| hydrogen to dimethyl sulfoxide electron transfer | 1 / 2 |
| indole-3-acetate biosynthesis III (bacteria) | 1 / 2 |
| linalool biosynthesis I | 1 / 2 |
| linamarin degradation | 1 / 2 |
| linoleate biosynthesis II (animals) | 1 / 2 |
| lipoate salvage I | 1 / 2 |
| lotaustralin degradation | 1 / 2 |
| manganese oxidation II | 1 / 2 |
| menaquinol-10 biosynthesis | 1 / 2 |
| menaquinol-11 biosynthesis | 1 / 2 |
| menaquinol-12 biosynthesis | 1 / 2 |
| menaquinol-13 biosynthesis | 1 / 2 |
| menaquinol-7 biosynthesis | 1 / 2 |
| methanol oxidation to formaldehyde IV | 1 / 2 |
| methylglyoxal degradation III | 1 / 2 |
| mevalonate degradation | 1 / 2 |
| nitrate reduction II (assimilatory) | 1 / 2 |
| nitrate reduction III (dissimilatory) | 1 / 2 |
| nitrate reduction V (assimilatory) | 1 / 2 |
| nitrate reduction VIII (dissimilatory) | 1 / 2 |
| nitrate reduction VIIIb (dissimilatory) | 1 / 2 |
| octopamine biosynthesis | 1 / 2 |
| oleate β-oxidation (thioesterase-dependent, yeast) | 1 / 2 |
| palmitoleate biosynthesis II (plants and bacteria) | 1 / 2 |
| palmitoleate biosynthesis III (cyanobacteria) | 1 / 2 |
| periplasmic disulfide bond reduction | 1 / 2 |
| phenylethanol degradation | 1 / 2 |
| phenylethylamine degradation II | 1 / 2 |
| phenylmercury acetate degradation | 1 / 2 |
| phosphatidylcholine resynthesis via glycerophosphocholine | 1 / 2 |
| phospholipid remodeling (phosphatidate, yeast) | 1 / 2 |
| progesterone biosynthesis | 1 / 2 |
| pseudouridine degradation | 1 / 2 |
| putrescine biosynthesis III | 1 / 2 |
| putrescine degradation I | 1 / 2 |
| putrescine degradation V | 1 / 2 |
| pyrimidine ribonucleosides degradation | 1 / 2 |
| pyrimidine ribonucleosides salvage III | 1 / 2 |
| pyruvate fermentation to (R)-acetoin II | 1 / 2 |
| pyruvate fermentation to acetate III | 1 / 2 |
| pyruvate fermentation to acetate VIII | 1 / 2 |
| pyruvate fermentation to ethanol II | 1 / 2 |
| pyruvate to cytochrome bo oxidase electron transfer | 1 / 2 |
| salicylate glucosides biosynthesis II | 1 / 2 |
| sedoheptulose bisphosphate bypass | 1 / 2 |
| spermine biosynthesis | 1 / 2 |
| sterculate biosynthesis | 1 / 2 |
| succinate to cytochrome bd oxidase electron transfer | 1 / 2 |
| tetrahydropteridine recycling | 1 / 2 |
| thiamine diphosphate salvage I | 1 / 2 |
| thioredoxin pathway | 1 / 2 |
| trehalose biosynthesis II | 1 / 2 |
| trehalose biosynthesis III | 1 / 2 |
| trehalose degradation I (low osmolarity) | 1 / 2 |
| vanillin and vanillate degradation I | 1 / 2 |
| xanthine and xanthosine salvage | 1 / 2 |
| Entner-Doudoroff pathway III (semi-phosphorylative) | 6 / 9 |
| L-phenylalanine degradation IV (mammalian, via side chain) | 6 / 9 |
| TCA cycle VI (Helicobacter) | 6 / 9 |
| TCA cycle VII (acetate-producers) | 6 / 9 |
| benzoyl-CoA degradation III (anaerobic) | 6 / 9 |
| chitin biosynthesis | 6 / 9 |
| formaldehyde assimilation II (assimilatory RuMP Cycle) | 6 / 9 |
| photorespiration I | 6 / 9 |
| photorespiration III | 6 / 9 |
| pyridoxal 5'-phosphate salvage II (plants) | 6 / 9 |
| superpathway of Clostridium acetobutylicum acidogenic fermentation | 6 / 9 |
| valproate β-oxidation | 6 / 9 |
| (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered) | 3 / 5 |
| 1,5-anhydrofructose degradation | 3 / 5 |
| 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA | 3 / 5 |
| 3-chlorocatechol degradation II (ortho) | 3 / 5 |
| 3-hydroxy-4-methyl-anthranilate biosynthesis II | 3 / 5 |
| 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate | 3 / 5 |
| 4-chlorocatechol degradation | 3 / 5 |
| 4-hydroxy-2(1H)-quinolone biosynthesis | 3 / 5 |
| 4-nitrophenol degradation I | 3 / 5 |
| 4-nitrophenol degradation II | 3 / 5 |
| 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) | 3 / 5 |
| trans-4-hydroxy-L-proline degradation I | 3 / 5 |
| CDP-6-deoxy-D-gulose biosynthesis | 3 / 5 |
| CDP-diacylglycerol biosynthesis III | 3 / 5 |
| D-galacturonate degradation I | 3 / 5 |
| D-galacturonate degradation II | 3 / 5 |
| D-xylose degradation V | 3 / 5 |
| GDP-L-colitose biosynthesis | 3 / 5 |
| L-arginine degradation XIII (reductive Stickland reaction) | 3 / 5 |
| L-ascorbate degradation V | 3 / 5 |
| L-methionine biosynthesis I | 3 / 5 |
| acrylate degradation I | 3 / 5 |
| allantoin degradation to glyoxylate II | 3 / 5 |
| allantoin degradation to glyoxylate III | 3 / 5 |
| autoinducer AI-2 biosynthesis I | 3 / 5 |
| biotin biosynthesis from 8-amino-7-oxononanoate III | 3 / 5 |
| cinnamate and 3-hydroxycinnamate degradation to 2-hydroxypentadienoate | 3 / 5 |
| creatinine degradation II | 3 / 5 |
| cyanuric acid degradation II | 3 / 5 |
| cyclohexanol degradation | 3 / 5 |
| dTDP-4-O-demethyl-β-L-noviose biosynthesis | 3 / 5 |
| dZTP biosynthesis | 3 / 5 |
| ergothioneine biosynthesis II (fungi) | 3 / 5 |
| fatty acid β-oxidation II (plant peroxisome) | 3 / 5 |
| fatty acid β-oxidation IV (unsaturated, even number) | 3 / 5 |
| gallate degradation II | 3 / 5 |
| glucose and glucose-1-phosphate degradation | 3 / 5 |
| glutaryl-CoA degradation | 3 / 5 |
| nitrate reduction I (denitrification) | 3 / 5 |
| nitrate reduction VII (denitrification) | 3 / 5 |
| orthanilate degradation | 3 / 5 |
| phenylethanol biosynthesis | 3 / 5 |
| phosphatidate biosynthesis (yeast) | 3 / 5 |
| propanoyl-CoA degradation II | 3 / 5 |
| protein S-nitrosylation and denitrosylation | 3 / 5 |
| protocatechuate degradation III (para-cleavage pathway) | 3 / 5 |
| pyruvate fermentation to acetone | 3 / 5 |
| seleno-amino acid biosynthesis (plants) | 3 / 5 |
| superpathway of (R,R)-butanediol biosynthesis | 3 / 5 |
| superpathway of L-phenylalanine and L-tyrosine biosynthesis | 3 / 5 |
| superpathway of pyrimidine ribonucleosides degradation | 3 / 5 |
| superpathway of sulfide oxidation (Starkeya novella) | 3 / 5 |
| uracil degradation III | 3 / 5 |
| urea cycle | 3 / 5 |
| chorismate biosynthesis II (archaea) | 8 / 12 |
| superpathway of L-citrulline metabolism | 8 / 12 |
| superpathway of pyridoxal 5'-phosphate biosynthesis and salvage | 8 / 12 |
| 2-deoxy-D-ribose degradation II | 5 / 8 |
| 4-hydroxyphenylacetate degradation | 5 / 8 |
| L-arabinose degradation IV | 5 / 8 |
| adenosine nucleotides degradation I | 5 / 8 |
| bacterial bioluminescence | 5 / 8 |
| glycine betaine degradation I | 5 / 8 |
| protocatechuate degradation I (meta-cleavage pathway) | 5 / 8 |
| superpathway of allantoin degradation in plants | 5 / 8 |
| L-tryptophan degradation III (eukaryotic) | 10 / 15 |
| γ-resorcylate degradation I | 2 / 4 |
| γ-resorcylate degradation II | 2 / 4 |
| (2S)-ethylmalonyl-CoA biosynthesis | 2 / 4 |
| (R)-lactate fermentation to propanoate II (acrylate pathway) | 2 / 4 |
| 2-hydroxybiphenyl degradation | 2 / 4 |
| 2-oxobutanoate degradation I | 2 / 4 |
| 3,3'-disulfanediyldipropannoate degradation | 2 / 4 |
| 3,3'-thiodipropanoate degradation | 2 / 4 |
| 3-chlorobenzoate degradation I (via chlorocatechol) | 2 / 4 |
| 4-aminophenol degradation | 2 / 4 |
| 4-chlorobenzoate degradation | 2 / 4 |
| 4-sulfocatechol degradation | 2 / 4 |
| 4-toluenesulfonate degradation I | 2 / 4 |
| N-hydroxy-L-pipecolate biosynthesis | 2 / 4 |
| S-(2-succinyl)-L-cysteine degradation | 2 / 4 |
| all-trans-farnesol biosynthesis | 2 / 4 |
| erythro-tetrahydrobiopterin biosynthesis I | 2 / 4 |
| threo-tetrahydrobiopterin biosynthesis | 2 / 4 |
| L-arginine degradation IX (arginine:pyruvate transaminase pathway) | 2 / 4 |
| L-arginine degradation VI (arginase 2 pathway) | 2 / 4 |
| L-arginine degradation VIII (arginine oxidase pathway) | 2 / 4 |
| L-methionine biosynthesis IV | 2 / 4 |
| L-phenylalanine biosynthesis II | 2 / 4 |
| L-phenylalanine degradation III | 2 / 4 |
| L-selenocysteine biosynthesis II (archaea and eukaryotes) | 2 / 4 |
| L-tyrosine degradation III | 2 / 4 |
| adenine and adenosine salvage III | 2 / 4 |
| adenosylcobalamin biosynthesis from adenosylcobinamide-GDP II | 2 / 4 |
| allantoin degradation to ureidoglycolate II (ammonia producing) | 2 / 4 |
| aminopropanol phosphate biosynthesis II | 2 / 4 |
| arsenic detoxification (bacteria) | 2 / 4 |
| canavanine biosynthesis | 2 / 4 |
| chitin deacetylation | 2 / 4 |
| choline degradation IV | 2 / 4 |
| dTDP-β-D-fucofuranose biosynthesis | 2 / 4 |
| dTDP-6-deoxy-α-D-allose biosynthesis | 2 / 4 |
| dTDP-N-acetylthomosamine biosynthesis | 2 / 4 |
| dTDP-N-acetylviosamine biosynthesis | 2 / 4 |
| diphenyl ethers degradation | 2 / 4 |
| fatty acid α-oxidation I (plants) | 2 / 4 |
| fatty acid biosynthesis initiation (mitochondria) | 2 / 4 |
| guanosine nucleotides degradation I | 2 / 4 |
| leucopelargonidin and leucocyanidin biosynthesis | 2 / 4 |
| linustatin bioactivation | 2 / 4 |
| mannitol degradation II | 2 / 4 |
| methyl phomopsenoate biosynthesis | 2 / 4 |
| methylphosphonate biosynthesis | 2 / 4 |
| monoacylglycerol metabolism (yeast) | 2 / 4 |
| naringenin biosynthesis (engineered) | 2 / 4 |
| phospholipid remodeling (phosphatidylethanolamine, yeast) | 2 / 4 |
| phosphopantothenate biosynthesis III (archaea) | 2 / 4 |
| putrescine degradation III | 2 / 4 |
| spermidine biosynthesis II | 2 / 4 |
| spermidine biosynthesis III | 2 / 4 |
| sulfolactate degradation II | 2 / 4 |
| C4 photosynthetic carbon assimilation cycle, NAD-ME type | 7 / 11 |
| pyruvate fermentation to hexanol (engineered) | 7 / 11 |
| reductive TCA cycle I | 7 / 11 |
| toluene degradation III (aerobic) (via p-cresol) | 7 / 11 |
| ethene biosynthesis V (engineered) | 17 / 25 |
| tetradecanoate biosynthesis (mitochondria) | 17 / 25 |
| 2,4,6-trichlorophenol degradation | 4 / 7 |
| 4,5-dichlorocatechol degradation | 4 / 7 |
| C4 photosynthetic carbon assimilation cycle, NADP-ME type | 4 / 7 |
| D-xylose degradation IV | 4 / 7 |
| L-Nδ-acetylornithine biosynthesis | 4 / 7 |
| L-ascorbate biosynthesis VIII (engineered pathway) | 4 / 7 |
| L-glutamate degradation XI (reductive Stickland reaction) | 4 / 7 |
| L-isoleucine biosynthesis III | 4 / 7 |
| UDP-N-acetyl-D-galactosamine biosynthesis II | 4 / 7 |
| ergothioneine biosynthesis I (bacteria) | 4 / 7 |
| glycine betaine degradation III | 4 / 7 |
| incomplete reductive TCA cycle | 4 / 7 |
| lipoate biosynthesis and incorporation IV (yeast) | 4 / 7 |
| nylon-6 oligomer degradation | 4 / 7 |
| pyrroloquinoline quinone biosynthesis | 4 / 7 |
| pyruvate fermentation to butanoate | 4 / 7 |
| serotonin degradation | 4 / 7 |
| superpathway of β-D-glucuronosides degradation | 4 / 7 |
| toluene degradation V (aerobic) (via toluene-cis-diol) | 4 / 7 |
| superpathway of GDP-mannose-derived O-antigen building blocks biosynthesis | 9 / 14 |
| 1-(sn-glycero-1-phospho)-1D-myo-inositol biosynthesis | 1 / 3 |
| 1-(sn-glycero-3-phospho)-1D-myo-inositol biosynthesis | 1 / 3 |
| 2,3-dihydroxybenzoate biosynthesis | 1 / 3 |
| 2-deoxy-α-D-ribose 1-phosphate degradation | 1 / 3 |
| 2-deoxy-D-ribose degradation I | 1 / 3 |
| 2-nitrotoluene degradation | 1 / 3 |
| 4-aminobutanoate degradation IV | 1 / 3 |
| p-cymene degradation to p-cumate | 1 / 3 |
| bis(guanylyl molybdopterin) cofactor sulfurylation | 1 / 3 |
| sn-glycerol 3-phosphate anaerobic respiration | 1 / 3 |
| CMP-N-acetylneuraminate biosynthesis II (bacteria) | 1 / 3 |
| D-myo-inositol (1,4,5)-trisphosphate degradation | 1 / 3 |
| D-carnitine degradation I | 1 / 3 |
| D-erythronate degradation I | 1 / 3 |
| D-galactose detoxification | 1 / 3 |
| D-glucosaminate degradation | 1 / 3 |
| D-phenylglycine degradation | 1 / 3 |
| D-sorbitol biosynthesis I | 1 / 3 |
| D-threonate degradation | 1 / 3 |
| GDP-N-acetyl-α-D-perosamine biosynthesis | 1 / 3 |
| GDP-N-formyl-α-D-perosamine biosynthesis | 1 / 3 |
| GDP-mycosamine biosynthesis | 1 / 3 |
| L-arginine degradation I (arginase pathway) | 1 / 3 |
| L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway) | 1 / 3 |
| L-carnitine degradation III | 1 / 3 |
| L-methionine degradation III | 1 / 3 |
| L-methionine salvage from L-homocysteine | 1 / 3 |
| L-tyrosine degradation IV (to 4-methylphenol) | 1 / 3 |
| NAD phosphorylation and dephosphorylation | 1 / 3 |
| UDP-yelosamine biosynthesis | 1 / 3 |
| UTP and CTP dephosphorylation II | 1 / 3 |
| adenine and adenosine salvage V | 1 / 3 |
| alkane biosynthesis I | 1 / 3 |
| alkane biosynthesis II | 1 / 3 |
| ammonia oxidation II (anaerobic) | 1 / 3 |
| assimilatory sulfate reduction II | 1 / 3 |
| caffeoylglucarate biosynthesis | 1 / 3 |
| cellulose and hemicellulose degradation (cellulolosome) | 1 / 3 |
| conversion of succinate to propanoate | 1 / 3 |
| cytochrome c biogenesis (system II type) | 1 / 3 |
| dimethylsulfoniopropanoate biosynthesis I (Wollastonia) | 1 / 3 |
| ethene biosynthesis I (plants) | 1 / 3 |
| ethene biosynthesis IV (engineered) | 1 / 3 |
| fatty acid biosynthesis initiation (type I) | 1 / 3 |
| ginkgotoxin biosynthesis | 1 / 3 |
| glycolate and glyoxylate degradation III | 1 / 3 |
| heptadecane biosynthesis | 1 / 3 |
| histamine degradation | 1 / 3 |
| indole-3-acetate biosynthesis VI (bacteria) | 1 / 3 |
| indole-3-acetate degradation I | 1 / 3 |
| itaconate biosynthesis II | 1 / 3 |
| lipoate biosynthesis and incorporation II | 1 / 3 |
| mannitol biosynthesis | 1 / 3 |
| methylglyoxal degradation IV | 1 / 3 |
| methylglyoxal degradation V | 1 / 3 |
| nitrite-dependent anaerobic methane oxidation | 1 / 3 |
| oleate β-oxidation (reductase-dependent, yeast) | 1 / 3 |
| oleate biosynthesis I (plants) | 1 / 3 |
| ophiobolin F biosynthesis | 1 / 3 |
| oxalate degradation II | 1 / 3 |
| phosphopantothenate biosynthesis II | 1 / 3 |
| plastoquinol-9 biosynthesis I | 1 / 3 |
| plaunotol biosynthesis | 1 / 3 |
| prenylated FMNH2 biosynthesis | 1 / 3 |
| purine deoxyribonucleosides degradation II | 1 / 3 |
| putrescine biosynthesis II | 1 / 3 |
| pyrimidine deoxyribonucleotides dephosphorylation | 1 / 3 |
| pyruvate fermentation to acetate VI | 1 / 3 |
| quinate degradation I | 1 / 3 |
| quinate degradation II | 1 / 3 |
| rutin degradation | 1 / 3 |
| styrene degradation | 1 / 3 |
| sucrose biosynthesis III | 1 / 3 |
| sucrose degradation I (sucrose phosphotransferase) | 1 / 3 |
| sulfite oxidation III | 1 / 3 |
| sulfolactate degradation III | 1 / 3 |
| superpathway of 4-aminobutanoate degradation | 1 / 3 |
| superpathway of guanine and guanosine salvage | 1 / 3 |
| superpathway of linalool biosynthesis | 1 / 3 |
| taurine biosynthesis I | 1 / 3 |
| testosterone and androsterone degradation to androstendione (aerobic) | 1 / 3 |
| thiamine diphosphate biosynthesis III (Staphylococcus) | 1 / 3 |
| thiamine diphosphate biosynthesis IV (eukaryotes) | 1 / 3 |
| thiosulfate oxidation IV (multienzyme complex) | 1 / 3 |
| trehalose degradation IV | 1 / 3 |
| triacylglycerol degradation | 1 / 3 |
| urate conversion to allantoin II | 1 / 3 |
| urate conversion to allantoin III | 1 / 3 |
| vanillin biosynthesis I | 1 / 3 |
| 3-phenylpropanoate degradation | 6 / 10 |
| 5,6-dehydrokavain biosynthesis (engineered) | 6 / 10 |
| nicotine degradation III (VPP pathway) | 6 / 10 |
| photorespiration II | 6 / 10 |
| superpathway of pyrimidine ribonucleosides salvage | 6 / 10 |
| superpathway of sulfide oxidation (Acidithiobacillus ferrooxidans) | 6 / 10 |
| superpathway of vanillin and vanillate degradation | 6 / 10 |
| peptidoglycan biosynthesis V (β-lactam resistance) | 11 / 17 |
| purine nucleobases degradation II (anaerobic) | 16 / 24 |
| 3-methyl-branched fatty acid α-oxidation | 3 / 6 |
| 4-amino-3-hydroxybenzoate degradation | 3 / 6 |
| 4-hydroxymandelate degradation | 3 / 6 |
| 5-nitroanthranilate degradation | 3 / 6 |
| 6-gingerol analog biosynthesis (engineered) | 3 / 6 |
| D-arabinose degradation III | 3 / 6 |
| D-arabinose degradation IV | 3 / 6 |
| L-alanine degradation VI (reductive Stickland reaction) | 3 / 6 |
| L-ascorbate biosynthesis IV (animals, D-glucuronate pathway) | 3 / 6 |
| NAD(P)/NADPH interconversion | 3 / 6 |
| arsenic detoxification (plants) | 3 / 6 |
| dTDP-L-daunosamine biosynthesis | 3 / 6 |
| dTDP-sibirosamine biosynthesis | 3 / 6 |
| formaldehyde oxidation I | 3 / 6 |
| glycogen degradation II | 3 / 6 |
| methyl ketone biosynthesis (engineered) | 3 / 6 |
| polymyxin resistance | 3 / 6 |
| pyridoxal 5'-phosphate salvage I | 3 / 6 |
| superpathway of L-cysteine biosynthesis (fungi) | 3 / 6 |
| superpathway of guanosine nucleotides degradation (plants) | 3 / 6 |
| superpathway of pyrimidine deoxyribonucleosides degradation | 3 / 6 |
| superpathway of sulfolactate degradation | 3 / 6 |
| superpathway of taurine degradation | 3 / 6 |
| tabtoxinine-β-lactam biosynthesis | 3 / 6 |
| thiazole component of thiamine diphosphate biosynthesis I | 3 / 6 |
| toluene degradation II (aerobic) (via 4-methylcatechol) | 3 / 6 |
| 3-hydroxypropanoate cycle | 8 / 13 |
| indole glucosinolate activation (herbivore attack) | 8 / 13 |
| noradrenaline and adrenaline degradation | 8 / 13 |
| 1-butanol autotrophic biosynthesis (engineered) | 18 / 27 |
| 2,4,5-trichlorophenoxyacetate degradation | 5 / 9 |
| 3,4,6-trichlorocatechol degradation | 5 / 9 |
| reductive glycine pathway of autotrophic CO2 fixation | 5 / 9 |
| superpathway of L-alanine fermentation (Stickland reaction) | 5 / 9 |
| superpathway of pyrimidine deoxyribonucleoside salvage | 5 / 9 |
| 2,3-dihydroxybenzoate degradation | 2 / 5 |
| 3-chlorocatechol degradation I (ortho) | 2 / 5 |
| 4-coumarate degradation (aerobic) | 2 / 5 |
| 4-deoxy-L-threo-hex-4-enopyranuronate degradation | 2 / 5 |
| 4-hydroxyacetophenone degradation | 2 / 5 |
| N-(1-deoxy-D-fructos-1-yl)-L-asparagine degradation | 2 / 5 |
| ADP-L-glycero-β-D-manno-heptose biosynthesis | 2 / 5 |
| D-galactose degradation I (Leloir pathway) | 2 / 5 |
| D-xylose degradation III | 2 / 5 |
| D-xylose degradation VI | 2 / 5 |
| Kdo transfer to lipid IVA (Chlamydia) | 2 / 5 |
| L-lysine degradation IV | 2 / 5 |
| biphenyl degradation | 2 / 5 |
| bisphenol A degradation | 2 / 5 |
| carbazole degradation | 2 / 5 |
| coumarin biosynthesis (via 2-coumarate) | 2 / 5 |
| cyanuric acid degradation I | 2 / 5 |
| dTDP-α-D-mycaminose biosynthesis | 2 / 5 |
| dTDP-3-acetamido-α-D-fucose biosynthesis | 2 / 5 |
| dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis | 2 / 5 |
| dimethyl sulfide degradation II (oxidation) | 2 / 5 |
| dopamine degradation | 2 / 5 |
| ectoine biosynthesis | 2 / 5 |
| ethylbenzene degradation (anaerobic) | 2 / 5 |
| fatty acid β-oxidation V (unsaturated, odd number, di-isomerase-dependent) | 2 / 5 |
| felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis | 2 / 5 |
| glucosylglycerol biosynthesis | 2 / 5 |
| isopropanol biosynthesis (engineered) | 2 / 5 |
| lactate biosynthesis (archaea) | 2 / 5 |
| mandelate degradation I | 2 / 5 |
| mannitol cycle | 2 / 5 |
| melatonin degradation I | 2 / 5 |
| methylphosphonate degradation I | 2 / 5 |
| neurosporene biosynthesis | 2 / 5 |
| nicotinate degradation II | 2 / 5 |
| nitroglycerin degradation | 2 / 5 |
| queuosine biosynthesis III (queuosine salvage) | 2 / 5 |
| salicylate degradation IV | 2 / 5 |
| selenate reduction | 2 / 5 |
| sucrose degradation V (sucrose α-glucosidase) | 2 / 5 |
| sulfide oxidation IV (mitochondria) | 2 / 5 |
| superpathway of L-cysteine biosynthesis (mammalian) | 2 / 5 |
| superpathway of plastoquinol biosynthesis | 2 / 5 |
| thiosulfate oxidation III (multienzyme complex) | 2 / 5 |
| purine nucleotides degradation I (plants) | 7 / 12 |
| photosynthetic 3-hydroxybutanoate biosynthesis (engineered) | 17 / 26 |
| (aminomethyl)phosphonate degradation | 4 / 8 |
| 3,5-dichlorocatechol degradation | 4 / 8 |
| L-fucose degradation III | 4 / 8 |
| L-mimosine degradation | 4 / 8 |
| butanol and isobutanol biosynthesis (engineered) | 4 / 8 |
| cobalamin salvage (eukaryotic) | 4 / 8 |
| sucrose biosynthesis II | 4 / 8 |
| superpathway of methylglyoxal degradation | 4 / 8 |
| superpathway of polyamine biosynthesis II | 4 / 8 |
| superpathway of N-acetylneuraminate degradation | 14 / 22 |
| β myrcene degradation | 1 / 4 |
| 2'-deoxymugineic acid phytosiderophore biosynthesis | 1 / 4 |
| 4-hydroxy-2-nonenal detoxification | 1 / 4 |
| 4-methylphenol degradation to protocatechuate | 1 / 4 |
| 5'-deoxyadenosine degradation II | 1 / 4 |
| 5,5'-dehydrodivanillate degradation | 1 / 4 |
| 6-hydroxymethyl-dihydropterin diphosphate biosynthesis V (Pyrococcus) | 1 / 4 |
| 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis | 1 / 4 |
| N-3-oxalyl-L-2,3-diaminopropanoate biosynthesis | 1 / 4 |
| bis(tungstenpterin) cofactor biosynthesis | 1 / 4 |
| trans-caffeate degradation (aerobic) | 1 / 4 |
| D-arabinose degradation II | 1 / 4 |
| GDP-D-glycero-α-D-manno-heptose biosynthesis | 1 / 4 |
| L-arginine degradation XII | 1 / 4 |
| L-ascorbate biosynthesis VI (plants, myo-inositol pathway) | 1 / 4 |
| L-tryptophan degradation VIII (to tryptophol) | 1 / 4 |
| NADPH to cytochrome c oxidase via plastocyanin (thylakoid membrane) | 1 / 4 |
| UDP-N-acetyl-β-L-fucosamine biosynthesis | 1 / 4 |
| UDP-N-acetyl-β-L-quinovosamine biosynthesis | 1 / 4 |
| acridone alkaloid biosynthesis | 1 / 4 |
| capsiconiate biosynthesis | 1 / 4 |
| catecholamine biosynthesis | 1 / 4 |
| citronellol degradation | 1 / 4 |
| creatinine degradation I | 1 / 4 |
| cytidine-5'-diphosphate-glycerol biosynthesis | 1 / 4 |
| dimethylsulfoniopropanoate biosynthesis II (Spartina) | 1 / 4 |
| dimethylsulfoniopropanoate biosynthesis III (algae and phytoplankton) | 1 / 4 |
| ethene biosynthesis II (microbes) | 1 / 4 |
| fatty acid biosynthesis initiation (plant mitochondria) | 1 / 4 |
| ferulate and sinapate biosynthesis | 1 / 4 |
| glycine betaine degradation II (mammalian) | 1 / 4 |
| glycogen biosynthesis I (from ADP-D-Glucose) | 1 / 4 |
| homocysteine and cysteine interconversion | 1 / 4 |
| hydroxycinnamate sugar acid ester biosynthesis | 1 / 4 |
| ipsdienol biosynthesis | 1 / 4 |
| lipoate salvage II | 1 / 4 |
| long chain fatty acid ester synthesis (engineered) | 1 / 4 |
| luteolin triglucuronide degradation | 1 / 4 |
| malonate degradation II (biotin-dependent) | 1 / 4 |
| melatonin degradation II | 1 / 4 |
| methylglyoxal degradation VI | 1 / 4 |
| methylwyosine biosynthesis | 1 / 4 |
| muropeptide degradation | 1 / 4 |
| oleate β-oxidation (isomerase-dependent, yeast) | 1 / 4 |
| oxalate degradation VI | 1 / 4 |
| penicillin G and penicillin V biosynthesis | 1 / 4 |
| phenylacetate degradation II (anaerobic) | 1 / 4 |
| phosphatidylcholine acyl editing | 1 / 4 |
| photosynthesis light reactions | 1 / 4 |
| polybrominated phenols biosynthesis | 1 / 4 |
| propane degradation I | 1 / 4 |
| purine deoxyribonucleosides degradation I | 1 / 4 |
| serotonin and melatonin biosynthesis | 1 / 4 |
| starch degradation III | 1 / 4 |
| starch degradation V | 1 / 4 |
| sucrose degradation VII (sucrose 3-dehydrogenase) | 1 / 4 |
| tRNA-uridine 2-thiolation (mammalian mitochondria) | 1 / 4 |
| tRNA-uridine 2-thiolation (yeast mitochondria) | 1 / 4 |
| taurine biosynthesis II | 1 / 4 |
| tetrahydromonapterin biosynthesis | 1 / 4 |
| toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol) | 1 / 4 |
| vitamin K-epoxide cycle | 1 / 4 |
| wax esters biosynthesis II | 1 / 4 |
| xanthohumol biosynthesis | 1 / 4 |
| xanthommatin biosynthesis | 1 / 4 |
| γ-hexachlorocyclohexane degradation | 6 / 11 |
| (8E,10E)-dodeca-8,10-dienol biosynthesis | 6 / 11 |
| NAD salvage (plants) | 6 / 11 |
| nicotine degradation II (pyrrolidine pathway) | 6 / 11 |
| superpathway of hexitol degradation (bacteria) | 11 / 18 |
| superpathway of purines degradation in plants | 11 / 18 |
| androstenedione degradation I (aerobic) | 16 / 25 |
| 2-carboxy-1,4-naphthoquinol biosynthesis | 3 / 7 |
| 3,6-anhydro-α-L-galactopyranose degradation | 3 / 7 |
| 3-dehydroquinate biosynthesis II (archaea) | 3 / 7 |
| 4-aminobutanoate degradation V | 3 / 7 |
| CMP-8-amino-3,8-dideoxy-D-manno-octulosonate biosynthesis | 3 / 7 |
| L-cysteine biosynthesis VI (reverse transsulfuration) | 3 / 7 |
| L-lysine degradation I | 3 / 7 |
| chlorosalicylate degradation | 3 / 7 |
| dTDP-β-L-digitoxose biosynthesis | 3 / 7 |
| dTDP-β-L-olivose biosynthesis | 3 / 7 |
| diacylglycerol and triacylglycerol biosynthesis | 3 / 7 |
| factor 430 biosynthesis | 3 / 7 |
| fatty acid β-oxidation VI (mammalian peroxisome) | 3 / 7 |
| glyphosate degradation III | 3 / 7 |
| pyruvate fermentation to propanoate I | 3 / 7 |
| sulfoquinovose degradation V | 3 / 7 |
| superpathway of thiamine diphosphate biosynthesis III (eukaryotes) | 3 / 7 |
| thiamine diphosphate salvage IV (yeast) | 3 / 7 |
| toxoflavin biosynthesis | 3 / 7 |
| Arg/N-end rule pathway (eukaryotic) | 8 / 14 |
| C4 photosynthetic carbon assimilation cycle, PEPCK type | 8 / 14 |
| anaerobic energy metabolism (invertebrates, mitochondrial) | 5 / 10 |
| flavin biosynthesis II (archaea) | 5 / 10 |
| pentachlorophenol degradation | 5 / 10 |
| superpathway of hexuronide and hexuronate degradation | 5 / 10 |
| superpathway of menaquinol-8 biosynthesis I | 5 / 10 |
| oxygenic photosynthesis | 10 / 17 |
| superpathway of Clostridium acetobutylicum acidogenic and solventogenic fermentation | 10 / 17 |
| 1,2-propanediol biosynthesis from lactate (engineered) | 2 / 6 |
| 3-hydroxy-4-methyl-anthranilate biosynthesis I | 2 / 6 |
| 4-ethylphenol degradation (anaerobic) | 2 / 6 |
| trans-lycopene biosynthesis I | 2 / 6 |
| Fe(II) oxidation | 2 / 6 |
| L-arabinose degradation V | 2 / 6 |
| UDP-N-acetyl-D-galactosamine biosynthesis III | 2 / 6 |
| bisabolene biosynthesis (engineered) | 2 / 6 |
| chitin degradation II (Vibrio) | 2 / 6 |
| dTDP-α-D-ravidosamine and dTDP-4-acetyl-α-D-ravidosamine biosynthesis | 2 / 6 |
| dTDP-D-desosamine biosynthesis | 2 / 6 |
| geraniol and nerol degradation | 2 / 6 |
| leukotriene biosynthesis | 2 / 6 |
| methanogenesis from acetate | 2 / 6 |
| methylthiopropanoate degradation I (cleavage) | 2 / 6 |
| nitrifier denitrification | 2 / 6 |
| norspermidine biosynthesis | 2 / 6 |
| palmitoyl ethanolamide biosynthesis | 2 / 6 |
| petroselinate biosynthesis | 2 / 6 |
| stearate biosynthesis I (animals) | 2 / 6 |
| superpathway of photosynthetic hydrogen production | 2 / 6 |
| superpathway of stearidonate biosynthesis (cyanobacteria) | 2 / 6 |
| superpathway of sulfur metabolism (Desulfocapsa sulfoexigens) | 2 / 6 |
| (S)-lactate fermentation to propanoate, acetate and hydrogen | 7 / 13 |
| glyoxylate assimilation | 7 / 13 |
| superpathway of Clostridium acetobutylicum solventogenic fermentation | 7 / 13 |
| 1,3-propanediol biosynthesis (engineered) | 4 / 9 |
| 1,4-dichlorobenzene degradation | 4 / 9 |
| 4-chloronitrobenzene degradation | 4 / 9 |
| 4-nitrotoluene degradation II | 4 / 9 |
| cis-geranyl-CoA degradation | 4 / 9 |
| Entner-Doudoroff pathway II (non-phosphorylative) | 4 / 9 |
| L-arginine biosynthesis IV (archaea) | 4 / 9 |
| allantoin degradation IV (anaerobic) | 4 / 9 |
| benzoate biosynthesis I (CoA-dependent, β-oxidative) | 4 / 9 |
| superpathway of demethylmenaquinol-8 biosynthesis I | 4 / 9 |
| superpathway of fermentation (Chlamydomonas reinhardtii) | 4 / 9 |
| ubiquinol-8 biosynthesis (late decarboxylation) | 4 / 9 |
| glycerol degradation to butanol | 9 / 16 |
| superpathway of aerobic toluene degradation | 19 / 30 |
| 4-hydroxybenzoate biosynthesis I (eukaryotes) | 1 / 5 |
| S-methyl-5-thio-α-D-ribose 1-phosphate degradation II | 1 / 5 |
| S-methyl-5-thio-α-D-ribose 1-phosphate degradation III | 1 / 5 |
| Salmonella enterica serotype O:3,10 O antigen biosynthesis | 1 / 5 |
| Salmonella enterica serotype O:54 O antigen biosynthesis | 1 / 5 |
| cis-zeatin biosynthesis | 1 / 5 |
| L-arginine degradation II (AST pathway) | 1 / 5 |
| L-ascorbate degradation IV | 1 / 5 |
| L-leucine degradation IV (reductive Stickland reaction) | 1 / 5 |
| L-phenylalanine degradation VI (reductive Stickland reaction) | 1 / 5 |
| L-tryptophan degradation XIII (reductive Stickland reaction) | 1 / 5 |
| L-tyrosine degradation V (reductive Stickland reaction) | 1 / 5 |
| aurachin RE biosynthesis | 1 / 5 |
| benzoate biosynthesis III (CoA-dependent, non-β-oxidative) | 1 / 5 |
| bisucaberin biosynthesis | 1 / 5 |
| bupropion degradation | 1 / 5 |
| chlorogenic acid biosynthesis II | 1 / 5 |
| citrate lyase activation | 1 / 5 |
| desferrioxamine B biosynthesis | 1 / 5 |
| desferrioxamine E biosynthesis | 1 / 5 |
| dibenzothiophene desulfurization | 1 / 5 |
| dissimilatory sulfate reduction I (to hydrogen sufide)) | 1 / 5 |
| fatty acid β-oxidation VII (yeast peroxisome) | 1 / 5 |
| ferrichrome A biosynthesis | 1 / 5 |
| flavonoid biosynthesis | 1 / 5 |
| heme b biosynthesis IV (Gram-positive bacteria) | 1 / 5 |
| hydroxycinnamic acid tyramine amides biosynthesis | 1 / 5 |
| hypusine biosynthesis | 1 / 5 |
| leucodelphinidin biosynthesis | 1 / 5 |
| lupanine biosynthesis | 1 / 5 |
| methylphosphonate degradation II | 1 / 5 |
| mono-trans, poly-cis decaprenyl phosphate biosynthesis | 1 / 5 |
| oxalate degradation III | 1 / 5 |
| phaselate biosynthesis | 1 / 5 |
| phosphatidate metabolism, as a signaling molecule | 1 / 5 |
| phospholipases | 1 / 5 |
| plastoquinol-9 biosynthesis II | 1 / 5 |
| pyrimidine deoxyribonucleosides salvage | 1 / 5 |
| tRNA-uridine 2-thiolation (thermophilic bacteria) | 1 / 5 |
| indole-3-acetate biosynthesis II | 6 / 12 |
| naphthalene degradation to acetyl-CoA | 6 / 12 |
| reductive TCA cycle II | 6 / 12 |
| 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II | 3 / 8 |
| p-cumate degradation | 3 / 8 |
| trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) | 3 / 8 |
| aromatic biogenic amine degradation (bacteria) | 3 / 8 |
| dTDP-β-L-4-epi-vancosamine biosynthesis | 3 / 8 |
| dTDP-β-L-megosamine biosynthesis | 3 / 8 |
| glutathione-mediated detoxification I | 3 / 8 |
| pyruvate fermentation to butanol I | 3 / 8 |
| shinorine biosynthesis | 3 / 8 |
| stellatic acid biosynthesis | 3 / 8 |
| superpathway of CDP-glucose-derived O-antigen building blocks biosynthesis | 3 / 8 |
| superpathway of atrazine degradation | 3 / 8 |
| superpathway of ornithine degradation | 3 / 8 |
| thiamine diphosphate formation from pyrithiamine and oxythiamine (yeast) | 3 / 8 |
| ubiquinol-9 biosynthesis (early decarboxylation) | 3 / 8 |
| ubiquinol-9 biosynthesis (late decarboxylation) | 3 / 8 |
| xyloglucan degradation II (exoglucanase) | 3 / 8 |
| gallate degradation III (anaerobic) | 5 / 11 |
| 3-hydroxypropanoate/4-hydroxybutanate cycle | 10 / 18 |
| superpathway of the 3-hydroxypropanoate cycle | 10 / 18 |
| β-(1,4)-mannan degradation | 2 / 7 |
| 2,4-dinitrotoluene degradation | 2 / 7 |
| 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus) | 2 / 7 |
| L-ascorbate degradation II (bacterial, aerobic) | 2 / 7 |
| L-homomethionine biosynthesis | 2 / 7 |
| L-rhamnose degradation III | 2 / 7 |
| ceramide degradation by α-oxidation | 2 / 7 |
| chitin degradation III (Serratia) | 2 / 7 |
| cremeomycin biosynthesis | 2 / 7 |
| dTDP-β-L-mycarose biosynthesis | 2 / 7 |
| fosfomycin biosynthesis | 2 / 7 |
| indole-3-acetate degradation II | 2 / 7 |
| isopropylamine degradation | 2 / 7 |
| lipoprotein posttranslational modification (Gram-negative bacteria) | 2 / 7 |
| spongiadioxin C biosynthesis | 2 / 7 |
| stachyose degradation | 2 / 7 |
| stigma estolide biosynthesis | 2 / 7 |
| sulfur oxidation IV (intracellular sulfur) | 2 / 7 |
| superpathway of purine deoxyribonucleosides degradation | 2 / 7 |
| superpathway of testosterone and androsterone degradation | 17 / 28 |
| 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast) | 4 / 10 |
| quinoxaline-2-carboxylate biosynthesis | 4 / 10 |
| sphingosine and sphingosine-1-phosphate metabolism | 4 / 10 |
| superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) | 4 / 10 |
| superpathway of menaquinol-10 biosynthesis | 4 / 10 |
| superpathway of menaquinol-11 biosynthesis | 4 / 10 |
| superpathway of menaquinol-12 biosynthesis | 4 / 10 |
| superpathway of menaquinol-13 biosynthesis | 4 / 10 |
| superpathway of menaquinol-6 biosynthesis | 4 / 10 |
| superpathway of menaquinol-7 biosynthesis | 4 / 10 |
| superpathway of menaquinol-9 biosynthesis | 4 / 10 |
| α-tomatine degradation | 1 / 6 |
| (5R)-carbapenem carboxylate biosynthesis | 1 / 6 |
| 10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast) | 1 / 6 |
| 4-coumarate degradation (anaerobic) | 1 / 6 |
| Porphyromonas gingivalis O-LPS antigen biosynthesis | 1 / 6 |
| Salmonella enterica serotype O:2 O antigen biosynthesis | 1 / 6 |
| Salmonella enterica serotype O:4 O antigen biosynthesis (group B1) | 1 / 6 |
| Salmonella enterica serotype O:9 O antigen biosynthesis | 1 / 6 |
| Salmonella enterica serotype O:9,46 O antigen biosynthesis | 1 / 6 |
| D-cycloserine biosynthesis | 1 / 6 |
| DIBOA-glucoside biosynthesis | 1 / 6 |
| L-arginine degradation XIV (oxidative Stickland reaction) | 1 / 6 |
| L-canavanine degradation II | 1 / 6 |
| L-lysine degradation III | 1 / 6 |
| adlupulone and adhumulone biosynthesis | 1 / 6 |
| alkane oxidation | 1 / 6 |
| androgen biosynthesis | 1 / 6 |
| beta-carboline biosynthesis | 1 / 6 |
| butachlor degradation | 1 / 6 |
| candicidin biosynthesis | 1 / 6 |
| coenzyme M biosynthesis II | 1 / 6 |
| colupulone and cohumulone biosynthesis | 1 / 6 |
| hydrogen sulfide biosynthesis II (mammalian) | 1 / 6 |
| hydroxycinnamic acid serotonin amides biosynthesis | 1 / 6 |
| lupulone and humulone biosynthesis | 1 / 6 |
| paspaline biosynthesis | 1 / 6 |
| procollagen hydroxylation and glycosylation | 1 / 6 |
| psilocybin biosynthesis | 1 / 6 |
| purine ribonucleosides degradation | 1 / 6 |
| stearate biosynthesis III (fungi) | 1 / 6 |
| superpathway of D-myo-inositol (1,4,5)-trisphosphate metabolism | 1 / 6 |
| superpathway of thiosulfate metabolism (Desulfovibrio sulfodismutans) | 1 / 6 |
| testosterone degradation (anaerobic) | 1 / 6 |
| toluene degradation to benzoyl-CoA (anaerobic) | 1 / 6 |
| triethylamine degradation | 1 / 6 |
| wybutosine biosynthesis | 1 / 6 |
| cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) | 6 / 13 |
| superpathway of L-arginine and L-ornithine degradation | 6 / 13 |
| 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) | 3 / 9 |
| 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic) | 3 / 9 |
| 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent) | 3 / 9 |
| L-lysine degradation V | 3 / 9 |
| UDP-sugars interconversion | 3 / 9 |
| dTDP-α-D-forosamine biosynthesis | 3 / 9 |
| dTDP-α-D-olivose, dTDP-α-D-oliose and dTDP-α-D-mycarose biosynthesis | 3 / 9 |
| jadomycin biosynthesis | 3 / 9 |
| nicotine biosynthesis | 3 / 9 |
| superpathway of demethylmenaquinol-6 biosynthesis I | 3 / 9 |
| superpathway of demethylmenaquinol-9 biosynthesis | 3 / 9 |
| syringate degradation | 5 / 12 |
| β-carotene biosynthesis (engineered) | 2 / 8 |
| 2-allylmalonyl-CoA biosynthesis | 2 / 8 |
| 2-methylpropene degradation | 2 / 8 |
| 3-hydroxyquinaldate biosynthesis | 2 / 8 |
| L-rhamnose degradation II | 2 / 8 |
| anandamide biosynthesis II | 2 / 8 |
| glycogen biosynthesis III (from α-maltose 1-phosphate) | 2 / 8 |
| glycogen degradation I | 2 / 8 |
| grixazone biosynthesis | 2 / 8 |
| lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales) | 2 / 8 |
| plasmalogen degradation | 2 / 8 |
| polybrominated dihydroxylated diphenyl ethers biosynthesis | 2 / 8 |
| sorgoleone biosynthesis | 2 / 8 |
| superpathway of dimethylsulfoniopropanoate degradation | 2 / 8 |
| superpathway of polyamine biosynthesis III | 2 / 8 |
| ubiquinol-10 biosynthesis (early decarboxylation) | 2 / 8 |
| ubiquinol-6 biosynthesis (late decarboxylation) | 2 / 8 |
| ubiquinol-7 biosynthesis (early decarboxylation) | 2 / 8 |
| ubiquinol-7 biosynthesis (late decarboxylation) | 2 / 8 |
| vanchrobactin biosynthesis | 2 / 8 |
| adenosylcobalamin biosynthesis I (anaerobic) | 22 / 36 |
| p-cymene degradation | 4 / 11 |
| enterobactin biosynthesis | 4 / 11 |
| ethylmalonyl-CoA pathway | 4 / 11 |
| superpathway of L-arginine, putrescine, and 4-aminobutanoate degradation | 4 / 11 |
| superpathway of candicidin biosynthesis | 4 / 11 |
| gluconeogenesis II (Methanobacterium thermoautotrophicum) | 9 / 18 |
| (S)-reticuline biosynthesis II | 1 / 7 |
| 2-arachidonoylglycerol biosynthesis | 1 / 7 |
| myo-inositol degradation I | 1 / 7 |
| CMP-diacetamido-8-epilegionaminic acid biosynthesis | 1 / 7 |
| alginate degradation | 1 / 7 |
| arachidonate biosynthesis III (6-desaturase, mammals) | 1 / 7 |
| benzoyl-CoA degradation II (anaerobic) | 1 / 7 |
| brassicicene C biosynthesis | 1 / 7 |
| caffeine degradation III (bacteria, via demethylation) | 1 / 7 |
| capsaicin biosynthesis | 1 / 7 |
| icosapentaenoate biosynthesis II (6-desaturase, mammals) | 1 / 7 |
| icosapentaenoate biosynthesis III (8-desaturase, mammals) | 1 / 7 |
| lacto-series glycosphingolipids biosynthesis | 1 / 7 |
| limonene degradation IV (anaerobic) | 1 / 7 |
| lipid A-core biosynthesis (P. gingivalis) | 1 / 7 |
| lycopadiene biosynthesis | 1 / 7 |
| mevalonate pathway I (eukaryotes and bacteria) | 1 / 7 |
| mevalonate pathway II (haloarchaea) | 1 / 7 |
| pyoluteorin biosynthesis | 1 / 7 |
| roseoflavin biosynthesis | 1 / 7 |
| succinate fermentation to butanoate | 1 / 7 |
| thiocoraline biosynthesis | 1 / 7 |
| vitamin E biosynthesis (tocopherols) | 1 / 7 |
| 5-hydroxymethylfurfural degradation | 3 / 10 |
| L-lysine fermentation to acetate and butanoate | 3 / 10 |
| [2Fe-2S] iron-sulfur cluster biosynthesis | 3 / 10 |
| methyl tert-butyl ether degradation | 3 / 10 |
| reductive acetyl coenzyme A pathway I (homoacetogenic bacteria) | 3 / 10 |
| superpathway of quinolone and alkylquinolone biosynthesis | 3 / 10 |
| 2,5-xylenol and 3,5-xylenol degradation | 5 / 13 |
| coumarins biosynthesis (engineered) | 5 / 13 |
| streptorubin B biosynthesis | 20 / 34 |
| 4-oxopentanoate degradation | 2 / 9 |
| L-lysine biosynthesis IV | 2 / 9 |
| L-lysine degradation II (L-pipecolate pathway) | 2 / 9 |
| acinetobactin biosynthesis | 2 / 9 |
| gliotoxin biosynthesis | 2 / 9 |
| pseudomonine biosynthesis | 2 / 9 |
| superpathway of menaquinol-8 biosynthesis III | 2 / 9 |
| teichuronic acid biosynthesis (B. subtilis 168) | 2 / 9 |
| ubiquinol-10 biosynthesis (late decarboxylation) | 2 / 9 |
| ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast) | 2 / 9 |
| superpathway of L-methionine salvage and degradation | 7 / 16 |
| L-glutamate degradation VII (to butanoate) | 4 / 12 |
| L-methionine salvage cycle I (bacteria and plants) | 4 / 12 |
| arsenic detoxification (yeast) | 4 / 12 |
| ergotamine biosynthesis | 4 / 12 |
| peptidoglycan maturation (meso-diaminopimelate containing) | 4 / 12 |
| superpathway of C1 compounds oxidation to CO2 | 4 / 12 |
| superpathway of nicotine biosynthesis | 4 / 12 |
| 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis | 1 / 8 |
| Salmonella enterica serotype O:8 O antigen biosynthesis | 1 / 8 |
| anguibactin biosynthesis | 1 / 8 |
| chlorogenic acid biosynthesis I | 1 / 8 |
| fusicoccin A biosynthesis | 1 / 8 |
| globo-series glycosphingolipids biosynthesis | 1 / 8 |
| isoprene biosynthesis II (engineered) | 1 / 8 |
| methanofuran biosynthesis | 1 / 8 |
| mevalonate pathway III (Thermoplasma) | 1 / 8 |
| mevalonate pathway IV (archaea) | 1 / 8 |
| sesamin biosynthesis | 1 / 8 |
| tRNA-uridine 2-thiolation (cytoplasmic) | 1 / 8 |
| cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) | 6 / 15 |
| purine nucleobases degradation I (anaerobic) | 6 / 15 |
| (S)-reticuline biosynthesis I | 3 / 11 |
| L-glutamate degradation VIII (to propanoate) | 3 / 11 |
| L-methionine salvage cycle III | 3 / 11 |
| aurachin A, B, C and D biosynthesis | 3 / 11 |
| superpathway of melatonin degradation | 3 / 11 |
| superpathway of ubiquinol-6 biosynthesis (late decarboxylation) | 3 / 11 |
| tRNA-uridine 2-thiolation and selenation (bacteria) | 3 / 11 |
| sporopollenin precursors biosynthesis | 8 / 18 |
| superpathway of Kdo2-lipid A biosynthesis | 13 / 25 |
| (2S,3E)-2-amino-4-methoxy-but-3-enoate biosynthesis | 2 / 10 |
| 2,2'-dihydroxybiphenyl degradation | 2 / 10 |
| CMP-legionaminate biosynthesis I | 2 / 10 |
| L-lysine biosynthesis V | 2 / 10 |
| pinoresinol degradation | 2 / 10 |
| poly(3-O-β-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis | 2 / 10 |
| rosmarinic acid biosynthesis I | 2 / 10 |
| starch biosynthesis | 2 / 10 |
| superpathway of enterobacterial common antigen biosynthesis | 2 / 10 |
| superpathway of menaquinol-8 biosynthesis II | 2 / 10 |
| tetracenomycin C biosynthesis | 2 / 10 |
| arsenic detoxification (mammals) | 7 / 17 |
| benzoate fermentation (to acetate and cyclohexane carboxylate) | 7 / 17 |
| 4,4'-diapolycopenedioate biosynthesis | 1 / 9 |
| Salmonella enterica serotype O:9,46,27 O antigen biosynthesis | 1 / 9 |
| ansatrienin biosynthesis | 1 / 9 |
| avenanthramide biosynthesis | 1 / 9 |
| botryococcenes and methylated squalene biosynthesis | 1 / 9 |
| chloramphenicol biosynthesis | 1 / 9 |
| diazepinomicin biosynthesis | 1 / 9 |
| glutathione-mediated detoxification II | 1 / 9 |
| methoxylated aromatic compound degradation II | 1 / 9 |
| myxochelin A and B biosynthesis | 1 / 9 |
| nicotinate degradation III | 1 / 9 |
| p-HBAD biosynthesis | 1 / 9 |
| staphyloxanthin biosynthesis | 1 / 9 |
| superpathway of sulfur oxidation (Acidianus ambivalens) | 1 / 9 |
| theophylline degradation | 1 / 9 |
| tunicamycin biosynthesis | 1 / 9 |
| vibriobactin biosynthesis | 1 / 9 |
| viridicatumtoxin biosynthesis | 1 / 9 |
| vitamin B6 degradation I | 1 / 9 |
| coenzyme B biosynthesis | 6 / 16 |
| crotonate fermentation (to acetate and cyclohexane carboxylate) | 6 / 16 |
| L-tryptophan degradation XI (mammalian, via kynurenine) | 11 / 23 |
| anandamide biosynthesis I | 3 / 12 |
| bacillibactin biosynthesis | 3 / 12 |
| indole glucosinolate activation (intact plant cell) | 3 / 12 |
| superpathway of fucose and rhamnose degradation | 3 / 12 |
| superpathway of sulfide oxidation (phototrophic sulfur bacteria) | 3 / 12 |
| L-methionine salvage cycle II (plants) | 2 / 11 |
| backdoor pathway of androgen biosynthesis | 2 / 11 |
| mycobactin biosynthesis | 2 / 11 |
| neopentalenoketolactone and pentalenate biosynthesis | 2 / 11 |
| poly(glycerol phosphate) wall teichoic acid biosynthesis | 2 / 11 |
| superpathway of nicotinate degradation | 7 / 18 |
| hopanoid biosynthesis (bacteria) | 4 / 14 |
| hypoglycin biosynthesis | 4 / 14 |
| myo-, chiro- and scyllo-inositol degradation | 1 / 10 |
| FR-900098 and FR-33289 antibiotics biosynthesis | 1 / 10 |
| bacilysin biosynthesis | 1 / 10 |
| caffeine degradation IV (bacteria, via demethylation and oxidation) | 1 / 10 |
| clavulanate biosynthesis | 1 / 10 |
| clorobiocin biosynthesis | 1 / 10 |
| curcuminoid biosynthesis | 1 / 10 |
| detoxification of reactive carbonyls in chloroplasts | 1 / 10 |
| justicidin B biosynthesis | 1 / 10 |
| matairesinol biosynthesis | 1 / 10 |
| nucleoside and nucleotide degradation (archaea) | 1 / 10 |
| petrobactin biosynthesis | 1 / 10 |
| nicotine degradation I (pyridine pathway) | 6 / 17 |
| peptido-conjugates in tissue regeneration biosynthesis | 6 / 17 |
| superpathway of betalain biosynthesis | 13 / 27 |
| 10-cis-heptadecenoyl-CoA degradation (yeast) | 2 / 12 |
| 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast) | 2 / 12 |
| camalexin biosynthesis | 2 / 12 |
| holomycin biosynthesis | 2 / 12 |
| poly(ribitol phosphate) wall teichoic acid biosynthesis I (B. subtilis) | 2 / 12 |
| rhizocticin A and B biosynthesis | 2 / 12 |
| monolignol biosynthesis | 4 / 15 |
| salinosporamide A biosynthesis | 4 / 15 |
| superpathway of phylloquinol biosynthesis | 4 / 15 |
| cytochrome c biogenesis (system I type) | 1 / 11 |
| pyochelin biosynthesis | 1 / 11 |
| tropane alkaloids biosynthesis | 1 / 11 |
| crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered) | 3 / 14 |
| firefly bioluminescence | 3 / 14 |
| tetrahydromethanopterin biosynthesis | 3 / 14 |
| type I lipoteichoic acid biosynthesis (S. aureus) | 5 / 17 |
| superpathway of microbial D-galacturonate and D-glucuronate degradation | 15 / 31 |
| (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase) | 2 / 13 |
| dehydrophos biosynthesis | 2 / 13 |
| guadinomine B biosynthesis | 2 / 13 |
| ceramide and sphingolipid recycling and degradation (yeast) | 4 / 16 |
| neolacto-series glycosphingolipids biosynthesis | 1 / 12 |
| superpathway of novobiocin biosynthesis | 6 / 19 |
| superpathway of seleno-compound metabolism | 6 / 19 |
| superpathway of ergosterol biosynthesis II | 11 / 26 |
| flavonoid di-C-glucosylation | 3 / 15 |
| superpathway of ergotamine biosynthesis | 5 / 18 |
| toluene degradation VI (anaerobic) | 5 / 18 |
| docosahexaenoate biosynthesis III (6-desaturase, mammals) | 2 / 14 |
| pederin biosynthesis | 2 / 14 |
| phytate degradation I | 2 / 14 |
| poly(ribitol phosphate) wall teichoic acid biosynthesis II (S. aureus) | 2 / 14 |
| superpathway of rosmarinic acid biosynthesis | 2 / 14 |
| cholesterol degradation to androstenedione I (cholesterol oxidase) | 4 / 17 |
| L-tryptophan degradation V (side chain pathway) | 1 / 13 |
| sphingolipid biosynthesis (plants) | 1 / 13 |
| superpathway of benzoxazinoid glucosides biosynthesis | 1 / 13 |
| cutin biosynthesis | 3 / 16 |
| plasmalogen biosynthesis I (aerobic) | 3 / 16 |
| superpathway of hyoscyamine (atropine) and scopolamine biosynthesis | 3 / 16 |
| jasmonic acid biosynthesis | 5 / 19 |
| superpathway of dTDP-glucose-derived O-antigen building blocks biosynthesis | 5 / 19 |
| cyclosporin A biosynthesis | 2 / 15 |
| pyrrolomycin biosynthesis | 1 / 14 |
| succinoglycan biosynthesis | 1 / 14 |
| Ac/N-end rule pathway | 6 / 21 |
| superpathway of aromatic compound degradation via 2-hydroxypentadienoate | 21 / 42 |
| suberin monomers biosynthesis | 5 / 20 |
| androstenedione degradation II (anaerobic) | 10 / 27 |
| cholesterol biosynthesis I | 2 / 16 |
| cholesterol biosynthesis II (via 24,25-dihydrolanosterol) | 2 / 16 |
| cholesterol biosynthesis III (via desmosterol) | 2 / 16 |
| superpathway of CMP-sialic acids biosynthesis | 1 / 15 |
| nicotine degradation V | 3 / 18 |
| superpathway of bitter acids biosynthesis | 3 / 18 |
| superpathway of phospholipid biosynthesis II (plants) | 10 / 28 |
| superpathway of cholesterol degradation I (cholesterol oxidase) | 20 / 42 |
| nicotine degradation IV | 1 / 16 |
| sulfazecin biosynthesis | 1 / 16 |
| tRNA methylation (yeast) | 1 / 16 |
| sitosterol degradation to androstenedione | 2 / 18 |
| streptomycin biosynthesis | 2 / 18 |
| secologanin and strictosidine biosynthesis | 1 / 17 |
| superpathway of UDP-N-acetylglucosamine-derived O-antigen building blocks biosynthesis | 6 / 24 |
| aliphatic glucosinolate biosynthesis, side chain elongation cycle | 10 / 30 |
| bryostatin biosynthesis | 2 / 19 |
| superpathway of erythromycin biosynthesis | 2 / 19 |
| platensimycin biosynthesis | 7 / 26 |
| superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis | 12 / 33 |
| Spodoptera littoralis pheromone biosynthesis | 4 / 22 |
| cholesterol degradation to androstenedione II (cholesterol dehydrogenase) | 4 / 22 |
| mycolyl-arabinogalactan-peptidoglycan complex biosynthesis | 1 / 18 |
| type IV lipoteichoic acid biosynthesis (S. pneumoniae) | 1 / 18 |
| 11-oxyandrogens biosynthesis | 2 / 20 |
| superpathway of polybrominated aromatic compound biosynthesis | 2 / 20 |
| anaerobic aromatic compound degradation (Thauera aromatica) | 7 / 27 |
| superpathway of bacteriochlorophyll a biosynthesis | 6 / 26 |
| superpathway of carotenoid biosynthesis in plants | 3 / 22 |
| superpathway of megalomicin A biosynthesis | 3 / 22 |
| superpathway of methanogenesis | 2 / 21 |
| brassinolide biosynthesis II | 1 / 20 |
| superpathway of dTDP-glucose-derived antibiotic building blocks biosynthesis | 3 / 23 |
| superpathway of ergosterol biosynthesis I | 5 / 26 |
| superpathway of cholesterol degradation II (cholesterol dehydrogenase) | 20 / 47 |
| cholesterol degradation to androstenedione III (anaerobic) | 2 / 22 |
| phosalacine biosynthesis | 4 / 25 |
| phosphinothricin tripeptide biosynthesis | 4 / 25 |
| curacin A biosynthesis | 1 / 22 |
| ganglio-series glycosphingolipids biosynthesis | 1 / 22 |
| phenolphthiocerol biosynthesis | 1 / 23 |
| mupirocin biosynthesis | 3 / 26 |
| Amaryllidacea alkaloids biosynthesis | 2 / 26 |
| brassinolide biosynthesis I | 1 / 25 |
| superpathway of pentose and pentitol degradation | 13 / 42 |
| superpathway of steroid hormone biosynthesis | 2 / 28 |
| bile acid biosynthesis, neutral pathway | 2 / 29 |
| superpathway of L-lysine degradation | 12 / 43 |
| Methanobacterium thermoautotrophicum biosynthetic metabolism | 21 / 56 |
| corallopyronin A biosynthesis | 2 / 30 |
| colibactin biosynthesis | 6 / 38 |
| superpathway of cholesterol biosynthesis | 5 / 38 |
| superpathway of cholesterol degradation III (oxidase) | 12 / 49 |
| superpathway of C28 brassinosteroid biosynthesis | 1 / 36 |
| superpathway of glycosphingolipids biosynthesis | 1 / 42 |
| arachidonate metabolites biosynthesis | 3 / 74 |
| mycolate biosynthesis | 26 / 205 |
| superpathway of mycolate biosynthesis | 27 / 239 |