MetaCyc Pathway: 4-oxopentanoate degradation in Cupriavidus basilensis FW507-4G11

Add experiment(s):


Butyrate--CoA ligase:
4-oxopentanoate + ATP + coenzyme A→4-oxopentanoyl-CoA + AMP + diphosphate
(EC 6.2.1.2)
No genes
Butyrate--CoA ligase:
4-hydroxypentanoate + ATP + coenzyme A→4-hydroxypentanoyl-CoA + AMP + diphosphate
(EC 6.2.1.2)
No genes
4-oxopentanoyl-CoA + NAD(P)H + H+→4-hydroxypentanoyl-CoA + NAD(P)+ (EC 1.1.1.M44)
No genes
4-hydroxypentanoyl-CoA + ATP→4-(phosphooxy)pentanoyl-CoA + ADP + H+ (EC 2.7.1.M16)
No genes
4-(phosphooxy)pentanoyl-CoA→3-pentenoyl-CoA + phosphate (EC 5.4.4.M2)
No genes
3-pentenoyl-CoA→(2E)-pent-2-enoyl-CoA (EC 5.4.4.M2)
No genes
(2E)-pent-2-enoyl-CoA + H2O→(3R)-3-hydroxypentanoyl-CoA (EC 5.4.4.M2)
No genes
Acetoacetyl-CoA reductase:
(3R)-3-hydroxypentanoyl-CoA + NADP+→3-oxopentanoyl-CoA + NADPH + H+
(EC 1.1.1.36)
RR42_RS07615
RR42_RS26085
Acetyl-CoA C-acyltransferase (in reverse):
3-oxopentanoyl-CoA + coenzyme A→propanoyl-CoA + acetyl-CoA
(EC 2.3.1.16; 2.3.1.9)
RR42_RS00885
RR42_RS02515
RR42_RS03010
RR42_RS07610
RR42_RS07645
RR42_RS10260
RR42_RS10540
RR42_RS11085
RR42_RS16595
RR42_RS22625
RR42_RS24300
RR42_RS24970
RR42_RS25210
RR42_RS25380
RR42_RS25455
RR42_RS26090
RR42_RS27160
RR42_RS27235
RR42_RS28055
RR42_RS28390
RR42_RS31890
RR42_RS31920
RR42_RS35915
RR42_RS36320
RR42_RS37020

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information