MetaCyc Pathway: shinorine biosynthesis in Cupriavidus basilensis FW507-4G11

Add experiment(s):


Serine--tRNA ligase:
L-serine + ATP + H+→(L-seryl)adenylate + diphosphate (EC 6.1.1.11; 6.1.1.3; 6.1.1.7; 6.2.1.72; 6.3.2.14)
RR42_RS04360
RR42_RS06600
RR42_RS15150
α-D-sedoheptulopyranose 7-phosphate→(R)-demethyl-4-deoxygadusol + phosphate + H2O (EC 4.2.3.154)
No genes
(R)-demethyl-4-deoxygadusol + S-adenosyl-L-methionine→(R)-4-deoxygadusol + S-adenosyl-L-homocysteine + H+
No genes
(R)-demethyl-4-deoxygadusol→(S)-demethyl-4-deoxygadusol (spontaneous)
No genes
(R)-4-deoxygadusol→(S)-4-deoxygadusol (spontaneous)
No genes
(S)-demethyl-4-deoxygadusol + S-adenosyl-L-methionine→(S)-4-deoxygadusol + S-adenosyl-L-homocysteine + H+
No genes
(S)-4-deoxygadusol + ATP + glycine→mycosporine glycine + ADP + 2 H+ + phosphate
No genes
mycosporine glycine + (L-seryl)adenylate→shinorine + AMP + 3 H+
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information