MetaCyc Pathway: tRNA methylation (yeast) in Cupriavidus basilensis FW507-4G11

Add experiment(s):


a cytosine34 in tRNA precursor + S-adenosyl-L-methionine→a 5 methylcytosine34 in tRNA precursor + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.202; 2.1.1.203)
No genes
a cytosine40 in tRNA precursor + S-adenosyl-L-methionine→a 5 methylcytosine40 in tRNA precursor + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.202)
No genes
a cytosine48 in tRNA + S-adenosyl-L-methionine→a 5-methylcytosine48 in tRNA + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.202)
No genes
a cytosine49 in tRNA + S-adenosyl-L-methionine→a 5-methylcytosine49 in tRNA + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.202)
No genes
a guanosine34 in tRNA + S-adenosyl-L-methionine→a 2'-O-methylguanosine34 in tRNA + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.205)
No genes
a uridine44 in tRNAser + S-adenosyl-L-methionine→a 2'-O-methyluridine44 in tRNAser + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.211)
No genes
a guanine10 in tRNA + S-adenosyl-L-methionine→an N2-methylguanine10 in tRNA + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.214)
No genes
a guanine26 in tRNA + S-adenosyl-L-methionine→an N2-methylguanine26 in tRNA + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.216)
No genes
an adenine58 in tRNA + S-adenosyl-L-methionine→an N1-methyladenine58 in tRNA + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.220)
No genes
a cytidine4 in tRNAPro + S-adenosyl-L-methionine→a 2'-O-methylcytidine4 in tRNAPro + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.225)
No genes
a cytidine4 in tRNAGly + S-adenosyl-L-methionine→a 2'-O-methylcytidine4 in tRNAGly (GCC) + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.225)
No genes
an adenosine4 in tRNAHis + S-adenosyl-L-methionine→a 2'-O-methyladenosine4 in tRNAHis + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.225)
No genes
guanine37 in tRNAPhe + S-adenosyl-L-methionine→an N1-methylguanine37 in tRNAPhe + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.228)
RR42_RS04630
a uridine34 in tRNA + acetyl-CoA + S-adenosyl-L-methionine + H2O→a carboxymethyluridine34 in tRNA + 5'-deoxyadenosine + coenzyme A + L-methionine + 2 H+ (EC 2.3.1.311)
No genes
an N2-methylguanine26 in tRNA + S-adenosyl-L-methionine→an N2dimethylguanine26 in tRNA + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.216)
No genes
a carboxymethyluridine34 in tRNA + S-adenosyl-L-methionine→a 5-(2-methoxy-2-oxoethyl)uridine34 in tRNA + S-adenosyl-L-homocysteine (EC 2.1.1.229)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information