MetaCyc Pathway: D-arabinose degradation III in Cupriavidus basilensis FW507-4G11

Add experiment(s):


D-arabinopyranose→D-arabinofuranose (spontaneous)
No genes
D-arabinofuranose + NADP+→D-arabinono-1,4-lactone + NADPH + H+ (EC 1.1.1.427)
No genes
D-arabinonolactonase:
D-arabinono-1,4-lactone + H2O→D-arabinonate + H+ (EC 3.1.1.30)
No genes
Arabinonate dehydratase:
D-arabinonate→2-dehydro-3-deoxy-D-pentonate + H2O (EC 4.2.1.5)
RR42_RS00275
RR42_RS26650
2-dehydro-3-deoxy-D-pentonate→2,5-dioxopentanoate + H2O (EC 4.2.1.141)
No genes
2,5-dioxovalerate dehydrogenase:
2,5-dioxopentanoate + NADP+ + H2O→2-oxoglutarate + NADPH + 2 H+ (EC 1.2.1.26)
RR42_RS04830
RR42_RS23090
RR42_RS27350

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information