MetaCyc Pathway: superpathway of nicotinate degradation in Cupriavidus basilensis FW507-4G11

Add experiment(s):


nicotinate + 2 an oxidized cytochrome + H2O→6-hydroxynicotinate + 2 H+ + 2 a reduced cytochrome (EC 1.17.2.1)
RR42_RS21620
nicotinate + an oxidized electron carrier + H2O→6-hydroxynicotinate + a reduced two electron carrier
No genes
Nicotinate dehydrogenase:
nicotinate + NADP+ + H2O→6-hydroxynicotinate + NADPH + H+
(EC 1.17.1.5)
No genes
6-hydroxynicotinate reductase (in reverse):
6-hydroxynicotinate + 2 H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→6-oxo-1,4,5,6-tetrahydronicotinate + 2 an oxidized ferredoxin [iron-sulfur] cluster
(EC 1.3.7.1)
No genes
6-hydroxynicotinate + NADH + dioxygen + 2 H+→2,5-dihydroxypyridine + CO2 + NAD+ + H2O (EC 1.14.13.114)
RR42_RS21625
6-hydroxynicotinate dehydrogenase:
6-hydroxynicotinate + dioxygen + H2O→2,6-dihydroxynicotinate + hydrogen peroxide
(EC 1.17.3.3)
No genes
2,5-dihydroxypyridine 5,6-dioxygenase:
2,5-dihydroxypyridine + dioxygenN-formylmaleamate + H+
(EC 1.13.11.9)
RR42_RS21640
RR42_RS26485
Enamidase:
6-oxo-1,4,5,6-tetrahydronicotinate + 2 H2O→(S)-2-formylglutarate + ammonium
(EC 3.5.2.18)
No genes
2,6-dihydroxynicotinate + dioxygen + H2O→maleamate + CO2 + formate + H+
No genes
2-hydroxymethylglutarate dehydrogenase (in reverse):
(S)-2-formylglutarate + NADH + H+→(S)-2-hydroxymethylglutarate + NAD+
(EC 1.1.1.291)
No genes
N-formylmaleamate + H2O→maleamate + formate + H+ (EC 3.5.1.106)
RR42_RS21635
RR42_RS26480
maleamate + H2O→maleate + ammonium (EC 3.5.1.107)
RR42_RS21645
RR42_RS26490
(S)-2-hydroxymethylglutarate→2-methyleneglutarate + H2O
No genes
2-methyleneglutarate mutase:
2-methyleneglutarate→(R)-3-methylitaconate
(EC 5.4.99.4)
No genes
Maleate isomerase:
maleate→fumarate
(EC 5.2.1.1)
RR42_RS21630
RR42_RS26475
Methylitaconate Delta-isomerase:
(R)-3-methylitaconate→dimethylmaleate
(EC 5.3.3.6)
No genes
Dimethylmaleate hydratase (in reverse):
dimethylmaleate + H2O→(2R,3S)-2,3-dimethylmalate
(EC 4.2.1.85)
No genes
2,3-dimethylmalate lyase:
(2R,3S)-2,3-dimethylmalate→pyruvate + propanoate
(EC 4.1.3.32)
RR42_RS22765

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information