MetaCyc Pathway: L-leucine degradation I in Cupriavidus basilensis FW507-4G11

Add experiment(s):


Branched-chain-amino-acid transaminase:
L-leucine + 2-oxoglutarate→4-methyl-2-oxopentanoate + L-glutamate
(EC 2.6.1.42; 2.6.1.6)
RR42_RS25890
2-oxoisovalerate dehydrogenase (acylating):
4-methyl-2-oxopentanoate + coenzyme A + NAD+→3-methylbutanoyl-CoA + CO2 + NADH
(EC 1.2.1.25)
No genes
3-methylbutanoyl-CoA + an oxidized electron-transfer flavoprotein + H+→3-methylcrotonyl-CoA + a reduced electron-transfer flavoprotein (EC 1.3.8.4)
RR42_RS00870
RR42_RS00895
RR42_RS05715
RR42_RS26910
Methylcrotonoyl-CoA carboxylase:
3-methylcrotonyl-CoA + ATP + hydrogen carbonate→3-methylglutaconyl-CoA + ADP + H+ + phosphate
(EC 6.4.1.4)
RR42_RS01350
RR42_RS26895
RR42_RS26905
RR42_RS29410
RR42_RS29420
RR42_RS32735
Methylglutaconyl-CoA hydratase (in reverse):
3-methylglutaconyl-CoA + H2O→(S)-3-hydroxy-3-methylglutaryl-CoA
(EC 4.2.1.18)
RR42_RS26900
Hydroxymethylglutaryl-CoA lyase:
(S)-3-hydroxy-3-methylglutaryl-CoA→acetoacetate + acetyl-CoA
(EC 4.1.3.4)
RR42_RS00955
RR42_RS12420
RR42_RS12425
RR42_RS13255
RR42_RS25095
RR42_RS25280
RR42_RS25285

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information