MetaCyc Pathway: superpathway of allantoin degradation in yeast in Cupriavidus basilensis FW507-4G11

Add experiment(s):


Allantoinase:
(S)-(+)-allantoin + H2O→allantoate + H+ (EC 3.5.2.5)
RR42_RS30230
Urea carboxylase:
CO2 + urea + ATP + H2O→urea-1-carboxylate + ADP + 2 H+ + phosphate (EC 6.3.4.6)
RR42_RS26670
Allantoicase:
allantoate + H2O→(S)-ureidoglycolate + urea (EC 3.5.3.4)
No genes
Allophanate hydrolase:
urea-1-carboxylate + H2O→2 carbamate + H+ (EC 3.5.1.54)
RR42_RS00640
RR42_RS00645
RR42_RS26665
carbamate + 2 H+→CO2 + ammonium (spontaneous) (EC 3.5.1.110; 3.5.1.20; 3.5.1.54; 4.2.1.104)
RR42_RS00640
RR42_RS00645
RR42_RS21045
RR42_RS26665
Ureidoglycolate lyase:
(S)-ureidoglycolate→glyoxylate + urea (EC 4.3.2.3)
RR42_RS26285

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information