MetaCyc Pathway: superpathway of plastoquinol biosynthesis in Cupriavidus basilensis FW507-4G11

Add experiment(s):


Reactions and Genes L-Phenylalanine (N)
remove
geranyl diphosphate + 7 3-methylbut-3-en-1-yl diphosphate→all-trans-nonaprenyl diphosphate + 7 diphosphate (EC 2.5.1.84)
No genes
Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
RR42_RS01570 +0.1
RR42_RS01590 -0.1
RR42_RS02275 +0.0
RR42_RS04465 -0.0
RR42_RS04985 -0.0
RR42_RS05770 -0.1
RR42_RS05990 +0.2
RR42_RS09190 +0.1
RR42_RS09965 +0.1
RR42_RS10785 -0.1
RR42_RS12545 -0.4
RR42_RS14560 +0.1
RR42_RS15580 +0.2
RR42_RS16470 -0.1
RR42_RS18910 N.D.
RR42_RS21340 -0.2
RR42_RS25980 -0.2
RR42_RS26005 +0.2
RR42_RS26015 +0.0
RR42_RS26185 -0.0
RR42_RS26625 -0.3
RR42_RS28185 +0.1
RR42_RS32165 +0.1
RR42_RS33140 -0.0
RR42_RS33490 -3.2
RR42_RS33805 -0.4
RR42_RS35305 -0.2
RR42_RS36780 -0.0
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)
RR42_RS32440 -0.0
RR42_RS32485 -0.1
RR42_RS33500 -3.2
all-trans-nonaprenyl diphosphate + homogentisate + H+→2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + CO2 + diphosphate (EC 2.5.1.117)
No genes
2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + S-adenosyl-L-methionine→plastoquinol-9 + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.295)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information