| Reactions and Genes | Carbon source Phenylacetic 2.5 mM |
|---|
| remove |
Long-chain-fatty-acid--CoA ligase:
a 3-methyl-branched 2,3,4-saturated fatty acid + ATP + coenzyme A→a 3-methyl-branched 2,3,4-saturated fatty acyl-CoA + AMP + diphosphate (EC 6.2.1.3) |
| RR42_RS01625 | -0.1 |
| RR42_RS18150 | -0.1 |
| RR42_RS18540 | -0.0 |
| RR42_RS25195 | -0.0 |
| RR42_RS26915 | +0.1 |
| RR42_RS28980 | +0.2 |
| RR42_RS29035 | -0.1 |
| RR42_RS29460 | +0.1 |
| RR42_RS29475 | -0.1 |
| RR42_RS36095 | +0.2 |
| RR42_RS36385 | -0.1 |
| RR42_RS36505 | +0.1 |
| a 3-methyl-branched 2,3,4-saturated fatty acyl-CoA + 2-oxoglutarate + dioxygen→a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA + CO2 + succinate |
| No genes |
| a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA→a 2-methyl branched 2,3,4-saturated fatty aldehyde + formyl-CoA (EC 4.1.2.63) |
| No genes |
Formyl-CoA hydrolase:
formyl-CoA + H2O→formate + coenzyme A + H+ (EC 3.1.2.10) |
| No genes |
Aldehyde dehydrogenase (NAD(+)):
a 2-methyl branched 2,3,4-saturated fatty aldehyde + NAD+ + H2O→a 2-methyl branched 2,3,4-saturated fatty acid + NADH + 2 H+ (EC 1.2.1.3) |
| RR42_RS01275 | +0.3 |
| RR42_RS04280 | -0.1 |
| RR42_RS11360 | -0.2 |
| RR42_RS13660 | +0.1 |
| RR42_RS18500 | +0.3 |
| RR42_RS21485 | +0.1 |
| RR42_RS23750 | -2.3 |
| RR42_RS24065 | +0.1 |
| RR42_RS24390 | +0.1 |
| RR42_RS24705 | +0.3 |
| RR42_RS24840 | -0.2 |
| RR42_RS25005 | -0.3 |
| RR42_RS25010 | -0.2 |
| RR42_RS26255 | -0.1 |
| RR42_RS27350 | +0.1 |
| RR42_RS27780 | +0.1 |
| RR42_RS29955 | +0.0 |
| RR42_RS32140 | +0.0 |
| RR42_RS34255 | -0.2 |
Long-chain-fatty-acid--CoA ligase:
a 2-methyl branched 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2-methyl branched 2,3,4-saturated fatty acyl-CoA + AMP + diphosphate (EC 6.2.1.3) |
| RR42_RS01625 | -0.1 |
| RR42_RS18150 | -0.1 |
| RR42_RS18540 | -0.0 |
| RR42_RS25195 | -0.0 |
| RR42_RS26915 | +0.1 |
| RR42_RS28980 | +0.2 |
| RR42_RS29035 | -0.1 |
| RR42_RS29460 | +0.1 |
| RR42_RS29475 | -0.1 |
| RR42_RS36095 | +0.2 |
| RR42_RS36385 | -0.1 |
| RR42_RS36505 | +0.1 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information