Experiment set5IT007 for Cupriavidus basilensis FW507-4G11
R2A with Lomefloxacin hydrochloride 0.00075 mM
Group: stressMedia: R2A + Lomefloxacin hydrochloride (0.000750 mM)
Culturing: cupriavidus_4G11_ML11, 24 deep-well microplate; Multitron, Aerobic, at 30 (C), shaken=750 rpm
Growth: about 3.5 generations
By: Mark on 05/13/2015
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate
Specific Phenotypes
For 53 genes in this experiment
For stress Lomefloxacin hydrochloride in Cupriavidus basilensis FW507-4G11
For stress Lomefloxacin hydrochloride across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Aminophosphonate metabolism
- Glycerophospholipid metabolism
- Lysine degradation
- Tyrosine metabolism
- Lipopolysaccharide biosynthesis
- Diterpenoid biosynthesis
- Fatty acid biosynthesis
- Fatty acid metabolism
- Biosynthesis of steroids
- Glycine, serine and threonine metabolism
- Methionine metabolism
- Lysine biosynthesis
- Arginine and proline metabolism
- Histidine metabolism
- Phenylalanine metabolism
- Benzoxazinone biosynthesis
- Glutathione metabolism
- Nucleotide sugars metabolism
- Glycerolipid metabolism
- Ether lipid metabolism
- Glycosphingolipid biosynthesis - ganglio series
- 1- and 2-Methylnaphthalene degradation
- Benzoate degradation via CoA ligation
- Ethylbenzene degradation
- Styrene degradation
- Butanoate metabolism
- Limonene and pinene degradation
- Carotenoid biosynthesis - General
- Caprolactam degradation
- Flavonoid biosynthesis
- Anthocyanin biosynthesis
- Alkaloid biosynthesis I
- Alkaloid biosynthesis II
- Metabolism of xenobiotics by cytochrome P450
- Drug metabolism - cytochrome P450
- Biosynthesis of unsaturated fatty acids
- Biosynthesis of type II polyketide backbone
- Biosynthesis of phenylpropanoids
- Biosynthesis of terpenoids and steroids
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: