Experiment set1IT027 for Cupriavidus basilensis FW507-4G11
R2A with Doxycycline hyclate 0.0001 mg/ml
Group: stressMedia: R2A + Doxycycline hyclate (1e-04 mg/ml)
Culturing: cupriavidus_4G11_ML11, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Mark on 3/3/2015
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate
Growth plate: 1176 E5,E6
Specific Phenotypes
For 29 genes in this experiment
For stress Doxycycline hyclate in Cupriavidus basilensis FW507-4G11
For stress Doxycycline hyclate across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Aminophosphonate metabolism
- Fatty acid biosynthesis
- Glycerophospholipid metabolism
- Carotenoid biosynthesis - General
- Biosynthesis of terpenoids and steroids
- Biosynthesis of plant hormones
- Biosynthesis of steroids
- Methionine metabolism
- Lysine degradation
- Histidine metabolism
- Tyrosine metabolism
- Benzoxazinone biosynthesis
- Diterpenoid biosynthesis
- Flavonoid biosynthesis
- Anthocyanin biosynthesis
- Alkaloid biosynthesis I
- Fatty acid metabolism
- Ubiquinone and menaquinone biosynthesis
- Purine metabolism
- Glycine, serine and threonine metabolism
- Lysine biosynthesis
- Arginine and proline metabolism
- Phenylalanine metabolism
- Tryptophan metabolism
- Selenoamino acid metabolism
- Nucleotide sugars metabolism
- Lipopolysaccharide biosynthesis
- Glycerolipid metabolism
- Ether lipid metabolism
- Glycosphingolipid biosynthesis - ganglio series
- 1- and 2-Methylnaphthalene degradation
- Naphthalene and anthracene degradation
- Benzoate degradation via CoA ligation
- Ethylbenzene degradation
- Butanoate metabolism
- Porphyrin and chlorophyll metabolism
- Limonene and pinene degradation
- Caprolactam degradation
- Phenylpropanoid biosynthesis
- Alkaloid biosynthesis II
- Insect hormone biosynthesis
- Drug metabolism - other enzymes
- Biosynthesis of unsaturated fatty acids
- Biosynthesis of type II polyketide backbone
- Biosynthesis of phenylpropanoids
- Biosynthesis of alkaloids derived from shikimate pathway
- Biosynthesis of alkaloids derived from histidine and purine
- Biosynthesis of alkaloids derived from terpenoid and polyketide
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: