Experiment set1IT015 for Cupriavidus basilensis FW507-4G11
R2A with Sodium Chlorite 4 mM
Group: stressMedia: R2A + Sodium Chlorite (4 mM)
Culturing: cupriavidus_4G11_ML11, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Mark on 3/3/2015
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate
Growth plate: 1174 D5,D6
Specific Phenotypes
For 5 genes in this experiment
For stress Sodium Chlorite in Cupriavidus basilensis FW507-4G11
For stress Sodium Chlorite across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Aromatic amino acid degradation | 1 |
| Pterin biosynthesis | 1 |
| Terminal cytochrome d ubiquinol oxidases | 1 |
| Terminal cytochrome oxidases | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| L-phenylalanine degradation I (aerobic) | 1 | 1 | 1 |
| L-tyrosine biosynthesis IV | 1 | 1 | 1 |
| aerobic respiration III (alternative oxidase pathway) | 3 | 3 | 1 |
| L-phenylalanine degradation V | 3 | 2 | 1 |