Experiment set13S507 for Cupriavidus basilensis FW507-4G11

Compare to:

Pseudomonas_EB271-B4-1_fractionated_DNA carbon source; Aerobic

Group: necromass as carbon source; aerobic
Media: Romy_basal_defined_aerobic + Pseudomonas_EB271-B4-1_fractionated_DNA (200 ppm)
Culturing: cupriavidus_4G11_ML11, tube, Aerobic
By: Bri Finley on 10/13/2025
Media components: 0.38 g/L Sodium phosphate monobasic monohydrate, 0.97 g/L Potassium phosphate dibasic, 0.1 g/L Potassium Chloride, 0.25 g/L Ammonium chloride, Wolfe's mineral mix (0.03 g/L Magnesium Sulfate Heptahydrate, 0.015 g/L Nitrilotriacetic acid, 0.01 g/L Sodium Chloride, 0.005 g/L Manganese (II) sulfate monohydrate, 0.001 g/L Cobalt chloride hexahydrate, 0.001 g/L Zinc sulfate heptahydrate, 0.001 g/L Calcium chloride dihydrate, 0.001 g/L Iron (II) sulfate heptahydrate, 0.00025 g/L Nickel (II) chloride hexahydrate, 0.0002 g/L Aluminum potassium sulfate dodecahydrate, 0.0001 g/L Copper (II) sulfate pentahydrate, 0.0001 g/L Boric Acid, 0.0001 g/L Sodium Molybdate Dihydrate, 0.003 mg/L Sodium selenite pentahydrate), Wolfe's vitamin mix (0.1 mg/L Pyridoxine HCl, 0.05 mg/L 4-Aminobenzoic acid, 0.05 mg/L Lipoic acid, 0.05 mg/L Nicotinic Acid, 0.05 mg/L Riboflavin, 0.05 mg/L Thiamine HCl, 0.05 mg/L calcium pantothenate, 0.02 mg/L biotin, 0.02 mg/L Folic Acid, 0.001 mg/L Cyanocobalamin)

Specific Phenotypes

For 3 genes in this experiment

For necromass as carbon source; aerobic Pseudomonas_EB271-B4-1_fractionated_DNA in Cupriavidus basilensis FW507-4G11

For necromass as carbon source; aerobic Pseudomonas_EB271-B4-1_fractionated_DNA across organisms

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
cellulose biosynthesis 1 1 1