Conservation of cofitness between PP_4697 and PP_3342 in Pseudomonas putida KT2440

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4697 poly(A) polymerase 1.0 PP_3342 nickel ABC transporter periplasmic binding protein 0.22 16
Dickeya dadantii 3937 0.42 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB 0.38 DDA3937_RS07280 nickel ABC transporter, nickel/metallophore periplasmic binding protein low > 74
Dickeya dianthicola ME23 0.42 DZA65_RS17145 polynucleotide adenylyltransferase PcnB 0.37 DZA65_RS08695 nickel ABC transporter, nickel/metallophore periplasmic binding protein low > 75
Klebsiella michiganensis M5al 0.41 BWI76_RS05005 polynucleotide adenylyltransferase 0.48 BWI76_RS26500 nickel ABC transporter, nickel/metallophore periplasmic binding protein low > 92
Dickeya dianthicola 67-19 0.41 HGI48_RS16060 polynucleotide adenylyltransferase PcnB 0.38 HGI48_RS08100 nickel ABC transporter, nickel/metallophore periplasmic binding protein low > 71
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_03519 Poly(A) polymerase I 0.49 OHPLBJKB_00227 Nickel-binding periplasmic protein low > 73
Escherichia fergusonii Becca 0.41 EFB2_03901 Poly(A) polymerase I 0.49 EFB2_00340 Nickel-binding periplasmic protein low > 86
Escherichia coli ECRC99 0.41 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB 0.49 KEDOAH_11590 nikA nickel ABC transporter substrate-binding protein — —
Escherichia coli ECRC62 0.41 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 0.49 BNILDI_03070 nikA nickel ABC transporter substrate-binding protein — —
Escherichia coli BW25113 0.41 b0143 pcnB poly(A) polymerase I (VIMSS) 0.49 b3476 nikA nickel transporter subunit (NCBI) low > 76
Escherichia coli ECRC101 0.41 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB 0.49 MCAODC_07070 nikA nickel ABC transporter substrate-binding protein — —
Escherichia coli ECOR38 0.41 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB 0.49 HEPCGN_15470 nikA nickel ABC transporter substrate-binding protein low > 85
Escherichia coli ECRC101 0.41 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB 0.49 OKFHMN_16550 nikA nickel ABC transporter substrate-binding protein — —
Escherichia coli BL21 0.41 ECD_00142 poly(A) polymerase 0.49 ECD_03325 nickel/heme ABC transporter periplasmic binding protein low > 60
Escherichia coli ECRC102 0.41 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB 0.49 NIAGMN_14320 nikA nickel ABC transporter substrate-binding protein — —
Escherichia coli ECRC98 0.41 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB 0.49 JDDGAC_20180 nikA nickel ABC transporter substrate-binding protein — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB 0.49 ECOLIN_RS19870 nickel ABC transporter substrate-binding protein low > 52
Escherichia coli ECOR27 0.41 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB 0.49 NOLOHH_08445 nikA nickel ABC transporter substrate-binding protein low > 57

Not shown: 49 genomes with orthologs for PP_4697 only; 4 genomes with orthologs for PP_3342 only