Conservation of cofitness between JDDGAC_01855 and JDDGAC_20170 in Escherichia coli ECRC98
14 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECRC98 | 1.0 | JDDGAC_01855 | ldtE | L,D-transpeptidase LdtE | 1.0 | JDDGAC_20170 | nikC | nickel ABC transporter permease subunit NikC | 0.65 | 13 |
Escherichia coli ECRC99 | 1.00 | KEDOAH_00830 | ldtE | L,D-transpeptidase LdtE | 1.00 | KEDOAH_11600 | nikC | nickel ABC transporter permease subunit NikC | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_18130 | ldtE | L,D-transpeptidase LdtE | 1.00 | MCAODC_07060 | nikC | nickel ABC transporter permease subunit NikC | low | > 87 |
Escherichia coli ECRC100 | 1.00 | OKFHMN_27280 | ldtE | L,D-transpeptidase LdtE | 1.00 | OKFHMN_16540 | nikC | nickel ABC transporter permease subunit NikC | low | > 80 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_00785 | ldtE | L,D-transpeptidase LdtE | 1.00 | NIAGMN_14310 | nikC | nickel ABC transporter permease subunit NikC | — | — |
Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS09385 | | L,D-transpeptidase LdtE | 0.99 | ECOLIN_RS26485 | | nickel ABC transporter permease subunit NikC | — | — |
Escherichia fergusonii Becca | 1.00 | EFB2_02314 | | putative L,D-transpeptidase YnhG | 0.99 | EFB2_00338 | | Nickel transport system permease protein NikC | low | > 86 |
Escherichia coli ECOR27 | 0.99 | NOLOHH_17800 | ldtE | L,D-transpeptidase LdtE | 1.00 | NOLOHH_08435 | nikC | nickel ABC transporter permease subunit NikC | low | > 75 |
Escherichia coli ECRC62 | 0.99 | BNILDI_16590 | ldtE | L,D-transpeptidase LdtE | 1.00 | BNILDI_03080 | nikC | nickel ABC transporter permease subunit NikC | low | > 75 |
Escherichia coli BW25113 | 0.99 | b1678 | ynhG | hypothetical protein (NCBI) | 1.00 | b3478 | nikC | nickel transporter subunit (NCBI) | low | > 76 |
Escherichia coli BL21 | 0.99 | ECD_01647 | | murein L,D-transpeptidase | 1.00 | ECD_03327 | | nickel ABC transporter permease | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_02046 | | putative L,D-transpeptidase YnhG | 0.99 | OHPLBJKB_00225 | | Nickel transport system permease protein NikC | low | > 73 |
Escherichia coli ECOR38 | 0.99 | HEPCGN_05665 | ldtE | L,D-transpeptidase LdtE | 1.00 | HEPCGN_15460 | nikC | nickel ABC transporter permease subunit NikC | low | > 87 |
Klebsiella michiganensis M5al | 0.70 | BWI76_RS16970 | | murein L,D-transpeptidase | 0.91 | BWI76_RS26510 | | nickel ABC transporter permease subunit NikC | low | > 92 |
Pseudomonas putida KT2440 | 0.29 | PP_2320 | | conserved exported protein of unknown function | 0.51 | PP_3344 | | nickel ABC transporter permease subunit | low | > 96 |
Not shown: 3 genomes with orthologs for JDDGAC_01855 only; 2 genomes with orthologs for JDDGAC_20170 only