Conservation of cofitness between HEPCGN_04790 and HEPCGN_03475 in Escherichia coli ECOR38
15 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECOR38 | 1.0 | HEPCGN_04790 | yobB | Uncharacterized protein YobB | 1.0 | HEPCGN_03475 | ldtA | L,D-transpeptidase | 0.61 | 4 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_01670 | yobB | Uncharacterized protein YobB | 0.98 | NIAGMN_22645 | ldtA | L,D-transpeptidase | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_19015 | yobB | Uncharacterized protein YobB | 0.98 | MCAODC_20250 | ldtA | L,D-transpeptidase | low | > 87 |
Escherichia coli ECRC98 | 1.00 | JDDGAC_00965 | yobB | Uncharacterized protein YobB | 0.98 | JDDGAC_29270 | ldtA | L,D-transpeptidase | low | > 86 |
Escherichia coli ECRC100 | 1.00 | OKFHMN_26390 | yobB | Uncharacterized protein YobB | 0.98 | OKFHMN_25140 | ldtA | L,D-transpeptidase | low | > 80 |
Escherichia coli ECRC99 | 1.00 | KEDOAH_01715 | yobB | Uncharacterized protein YobB | 0.98 | KEDOAH_02970 | ldtA | L,D-transpeptidase | — | — |
Escherichia fergusonii Becca | 0.99 | EFB2_02101 | | hypothetical protein | 1.00 | EFB2_01899 | | putative L,D-transpeptidase ErfK/SrfK | low | > 86 |
Escherichia coli BW25113 | 0.99 | b1843 | yobB | hypothetical protein (NCBI) | 0.97 | b1990 | erfK | conserved protein with NAD(P)-binding Rossmann-fold domain (NCBI) | low | > 76 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_01888 | | hypothetical protein | 0.99 | OHPLBJKB_01718 | | putative L,D-transpeptidase ErfK/SrfK | low | > 73 |
Escherichia coli ECOR27 | 0.99 | NOLOHH_16900 | yobB | Uncharacterized protein YobB | 0.97 | NOLOHH_16050 | ldtA | L,D-transpeptidase | low | > 75 |
Escherichia coli ECRC62 | 0.99 | BNILDI_15695 | yobB | Uncharacterized protein YobB | 0.98 | BNILDI_14880 | ldtA | L,D-transpeptidase | low | > 75 |
Escherichia coli BL21 | 0.98 | ECD_01814 | | C-N hydrolase family protein | 0.97 | ECD_01899 | | L,D-transpeptidase linking Lpp to murein | low | > 61 |
Escherichia coli Nissle 1917 | 0.98 | ECOLIN_RS10260 | | carbon-nitrogen hydrolase family protein YobB | 1.00 | ECOLIN_RS11615 | | L,D-transpeptidase | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.68 | GFF1622 | | Putative amidohydrolase | 0.79 | GFF3970 | | L,D-transpeptidase YbiS | low | > 78 |
Enterobacter sp. TBS_079 | 0.48 | MPMX20_02750 | | hypothetical protein | 0.76 | MPMX20_02985 | | putative L,D-transpeptidase ErfK/SrfK | low | > 85 |
Enterobacter asburiae PDN3 | 0.43 | EX28DRAFT_0711 | | Predicted amidohydrolase | 0.70 | EX28DRAFT_0563 | | Uncharacterized protein conserved in bacteria | low | > 76 |
Not shown: 8 genomes with orthologs for HEPCGN_04790 only; 2 genomes with orthologs for HEPCGN_03475 only