Conservation of cofitness between GFF3549 and GFF869 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

14 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3549 Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282) 1.0 GFF869 Protein ytfJ precursor 0.55 1
Escherichia coli ECOR38 0.92 HEPCGN_05585 ydiB quinate/shikimate dehydrogenase 0.88 HEPCGN_10225 ytfJ Uncharacterized protein YtfJ low > 87
Escherichia fergusonii Becca 0.92 EFB2_02300 Quinate/shikimate dehydrogenase 0.88 EFB2_04313 putative protein YtfJ low > 86
Escherichia coli BL21 0.92 ECD_01661 quinate/shikimate 5-dehydrogenase, NAD(P)-binding 0.88 ECD_04087 putative transcriptional regulator — —
Escherichia coli Nissle 1917 0.92 ECOLIN_RS09455 quinate/shikimate dehydrogenase 0.88 ECOLIN_RS24485 YtfJ family protein low > 55
Escherichia coli BW25113 0.92 b1692 ydiB quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) 0.86 b4216 ytfJ predicted transcriptional regulator (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_02032 Quinate/shikimate dehydrogenase 0.88 OHPLBJKB_03818 putative protein YtfJ low > 73
Escherichia coli ECRC62 0.92 BNILDI_16510 ydiB quinate/shikimate dehydrogenase 0.88 BNILDI_07230 ytfJ Uncharacterized protein YtfJ low > 75
Escherichia coli ECOR27 0.92 NOLOHH_17720 ydiB quinate/shikimate dehydrogenase 0.88 NOLOHH_04290 ytfJ Uncharacterized protein YtfJ low > 75
Escherichia coli ECRC100 0.92 OKFHMN_27200 ydiB quinate/shikimate dehydrogenase 0.88 OKFHMN_12025 ytfJ Uncharacterized protein YtfJ low > 80
Escherichia coli ECRC98 0.92 JDDGAC_01775 ydiB quinate/shikimate dehydrogenase 0.88 JDDGAC_15665 ytfJ Uncharacterized protein YtfJ low > 86
Escherichia coli ECRC99 0.92 KEDOAH_00910 ydiB quinate/shikimate dehydrogenase 0.88 KEDOAH_16130 ytfJ Uncharacterized protein YtfJ — —
Escherichia coli ECRC102 0.92 NIAGMN_00865 ydiB quinate/shikimate dehydrogenase 0.88 NIAGMN_09875 ytfJ Uncharacterized protein YtfJ — —
Escherichia coli ECRC101 0.92 MCAODC_18210 ydiB quinate/shikimate dehydrogenase 0.88 MCAODC_02540 ytfJ Uncharacterized protein YtfJ low > 87
Klebsiella michiganensis M5al 0.54 BWI76_RS04655 shikimate dehydrogenase 0.85 BWI76_RS02740 putative transcriptional regulator low > 92

Not shown: 35 genomes with orthologs for GFF3549 only; 6 genomes with orthologs for GFF869 only