Conservation of cofitness between GFF1053 and GFF6741 in Variovorax sp. SCN45

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF1053 no description 1.0 GFF6741 UPF0053 inner membrane protein YoaE 0.50 7
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_29960 GntR family transcriptional regulator 0.45 AO356_26450 hypothetical protein — —
Serratia liquefaciens MT49 0.32 IAI46_12455 FCD domain-containing protein 0.59 IAI46_14805 TerC family protein low > 86
Pseudomonas putida KT2440 0.26 PP_2908 DNA-binding transcriptional repressor 0.47 PP_3437 putative transporter low > 96
Escherichia coli ECOR38 0.24 HEPCGN_20165 csiR DNA-binding transcriptional regulator CsiR 0.56 HEPCGN_04930 yoaE CNNM family cation transport protein YoaE low > 87
Escherichia coli Nissle 1917 0.24 ECOLIN_RS14855 DNA-binding transcriptional regulator CsiR 0.56 ECOLIN_RS10100 CNNM family cation transport protein YoaE — —
Escherichia coli ECRC100 0.24 OKFHMN_20900 csiR DNA-binding transcriptional regulator CsiR 0.56 OKFHMN_26540 yoaE CNNM family cation transport protein YoaE low > 80
Escherichia coli BL21 0.24 ECD_02520 transcriptional repressor of csiD 0.56 ECD_01786 putative membrane protein/conserved protein low > 61
Escherichia coli ECRC101 0.24 MCAODC_11420 csiR DNA-binding transcriptional regulator CsiR 0.56 MCAODC_18870 yoaE CNNM family cation transport protein YoaE low > 87
Escherichia coli ECOR27 0.24 NOLOHH_12725 csiR DNA-binding transcriptional regulator CsiR 0.56 NOLOHH_17060 yoaE CNNM family cation transport protein YoaE low > 75
Escherichia coli ECRC98 0.24 JDDGAC_24560 csiR DNA-binding transcriptional regulator CsiR 0.56 JDDGAC_01115 yoaE CNNM family cation transport protein YoaE low > 86
Escherichia coli ECRC62 0.24 BNILDI_11285 csiR DNA-binding transcriptional regulator CsiR 0.56 BNILDI_15845 yoaE CNNM family cation transport protein YoaE low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01068 hypothetical protein 0.56 OHPLBJKB_01915 hypothetical protein low > 73
Escherichia coli ECRC99 0.24 KEDOAH_07240 csiR DNA-binding transcriptional regulator CsiR 0.56 KEDOAH_01570 yoaE CNNM family cation transport protein YoaE — —
Escherichia coli ECRC102 0.24 NIAGMN_18665 csiR DNA-binding transcriptional regulator CsiR 0.56 NIAGMN_01525 yoaE CNNM family cation transport protein YoaE — —
Escherichia coli BW25113 0.24 b2664 ygaE putative transcriptional regulator (VIMSS) 0.56 b1816 yoaE fused predicted membrane protein/conserved protein (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF1569 CsiR, transcriptional repressor of CsiD 0.55 GFF2830 Magnesium and cobalt efflux protein CorC low > 78
Escherichia fergusonii Becca 0.23 EFB2_01266 HTH-type transcriptional repressor GlaR 0.56 EFB2_02184 hypothetical protein low > 86

Not shown: 6 genomes with orthologs for GFF1053 only; 27 genomes with orthologs for GFF6741 only