Conservation of cofitness between GFF3115 and GFF2971 in Variovorax sp. SCN45

13 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF3115 Methionine ABC transporter substrate-binding protein 1.0 GFF2971 Transcriptional regulator, LysR family 0.57 7
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS08955 methionine ABC transporter substrate-binding protein 0.26 HSERO_RS02635 LysR family transcriptional regulator low > 78
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS28475 dioxygenase 0.56 RR42_RS28030 hypothetical protein low > 128
Escherichia coli ECOR38 0.43 HEPCGN_08000 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.25 HEPCGN_20725 hcaR DNA-binding transcriptional regulator HcaR low > 87
Escherichia coli BW25113 0.43 b0197 metQ DL-methionine transporter subunit (NCBI) 0.25 b2537 hcaR DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03464 D-methionine-binding lipoprotein MetQ 0.25 OHPLBJKB_01172 Hca operon transcriptional activator HcaR low > 73
Escherichia coli BL21 0.43 ECD_00196 DL-methionine transporter subunit 0.25 ECD_02429 hca operon transcriptional regulator low > 61
Escherichia coli ECRC62 0.43 BNILDI_09265 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.25 BNILDI_12055 hcaR DNA-binding transcriptional regulator HcaR low > 75
Escherichia coli ECOR27 0.43 NOLOHH_02405 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.25 NOLOHH_13255 hcaR DNA-binding transcriptional regulator HcaR low > 75
Escherichia coli ECRC100 0.42 OKFHMN_10060 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.25 OKFHMN_21585 hcaR DNA-binding transcriptional regulator HcaR low > 80
Escherichia coli ECRC101 0.42 MCAODC_00575 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.25 MCAODC_12115 hcaR DNA-binding transcriptional regulator HcaR low > 87
Escherichia coli ECRC102 0.42 NIAGMN_07910 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.25 NIAGMN_19355 hcaR DNA-binding transcriptional regulator HcaR
Escherichia coli ECRC98 0.42 JDDGAC_13655 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.25 JDDGAC_25260 hcaR DNA-binding transcriptional regulator HcaR low > 86
Escherichia coli ECRC99 0.42 KEDOAH_18095 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.25 KEDOAH_06635 hcaR DNA-binding transcriptional regulator HcaR

Not shown: 35 genomes with orthologs for GFF3115 only; 1 genomes with orthologs for GFF2971 only