Conservation of cofitness between ECD_00971 and ECD_03142 in Escherichia coli BL21

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00971 23S rRNA m(5)C1962 methyltransferase, SAM-dependent 1.0 ECD_03142 alternate ribosome-rescue factor A 0.57 15
Escherichia coli BW25113 1.00 b0967 yccW predicted methyltransferase (RefSeq) 1.00 b4550 yhdL hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS05085 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.99 ECOLIN_RS18890 alternative ribosome-rescue factor ArfA — —
Escherichia coli ECOR27 0.99 NOLOHH_21740 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 NOLOHH_09305 arfA alternative ribosome-rescue factor ArfA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02699 Ribosomal RNA large subunit methyltransferase I 1.00 OHPLBJKB_00412 Alternative ribosome-rescue factor A low > 73
Escherichia coli ECOR38 0.99 HEPCGN_23335 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.99 HEPCGN_16335 arfA alternative ribosome-rescue factor ArfA low > 87
Escherichia coli ECRC98 0.98 JDDGAC_08795 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 JDDGAC_21135 arfA alternative ribosome-rescue factor ArfA low > 86
Escherichia coli ECRC99 0.98 KEDOAH_22550 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 KEDOAH_10635 arfA alternative ribosome-rescue factor ArfA — —
Escherichia coli ECRC101 0.98 MCAODC_24575 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 MCAODC_08035 arfA alternative ribosome-rescue factor ArfA low > 87
Escherichia coli ECRC100 0.98 OKFHMN_05185 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 OKFHMN_17505 arfA alternative ribosome-rescue factor ArfA low > 80
Escherichia coli ECRC62 0.98 BNILDI_19905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 BNILDI_02215 arfA alternative ribosome-rescue factor ArfA low > 75
Escherichia coli ECRC102 0.98 NIAGMN_02905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 NIAGMN_15275 arfA alternative ribosome-rescue factor ArfA — —
Escherichia fergusonii Becca 0.98 EFB2_03104 Ribosomal RNA large subunit methyltransferase I 0.99 EFB2_00532 Alternative ribosome-rescue factor A low > 86
Enterobacter asburiae PDN3 0.95 EX28DRAFT_1976 Predicted SAM-dependent methyltransferases 0.79 EX28DRAFT_0036 Uncharacterized protein conserved in bacteria low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_01617 Ribosomal RNA large subunit methyltransferase I 0.82 MPMX20_04199 Alternative ribosome-rescue factor A low > 85
Serratia liquefaciens MT49 0.85 IAI46_08925 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.64 IAI46_23290 alternative ribosome-rescue factor A low > 86

Not shown: 66 genomes with orthologs for ECD_00971 only; 2 genomes with orthologs for ECD_03142 only