Conservation of cofitness between ECD_01084 and ECD_01929 in Escherichia coli BL21

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01084 DUF177 family protein 1.0 ECD_01929 regulator of length of O-antigen component of lipopolysaccharide chains 0.80 9
Escherichia coli ECRC62 1.00 BNILDI_19290 yceD 23S rRNA accumulation protein YceD 0.93 BNILDI_14705 wzzB LPS O-antigen chain length determinant protein WzzB low > 75
Escherichia coli ECOR38 1.00 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD 1.00 HEPCGN_03185 wzzB LPS O-antigen chain length determinant protein WzzB low > 87
Escherichia coli ECRC102 1.00 NIAGMN_24230 yceD 23S rRNA accumulation protein YceD 0.95 NIAGMN_22425 wzzB LPS O-antigen chain length determinant protein WzzB — —
Escherichia fergusonii Becca 1.00 EFB2_02887 Large ribosomal RNA subunit accumulation protein YceD 0.93 EFB2_01828 Chain length determinant protein low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS06290 23S rRNA accumulation protein YceD 0.93 ECOLIN_RS11980 LPS O-antigen chain length determinant protein WzzB low > 55
Escherichia coli ECRC99 1.00 KEDOAH_24155 yceD 23S rRNA accumulation protein YceD 0.95 KEDOAH_03670 wzzB LPS O-antigen chain length determinant protein WzzB — —
Escherichia coli BW25113 1.00 b1088 yceD hypothetical protein (NCBI) 0.99 b2027 wzzB regulator of length of O-antigen component of lipopolysaccharide chains (VIMSS) low > 76
Escherichia coli ECRC100 1.00 OKFHMN_03600 yceD 23S rRNA accumulation protein YceD 0.95 OKFHMN_24480 wzzB LPS O-antigen chain length determinant protein WzzB low > 80
Escherichia coli ECRC98 1.00 JDDGAC_07260 yceD 23S rRNA accumulation protein YceD 0.95 JDDGAC_28590 wzzB LPS O-antigen chain length determinant protein WzzB low > 86
Escherichia coli ECOR27 1.00 NOLOHH_21130 yceD 23S rRNA accumulation protein YceD 0.88 NOLOHH_15795 wzzB LPS O-antigen chain length determinant protein WzzB low > 75
Escherichia coli ECRC101 1.00 MCAODC_22960 yceD 23S rRNA accumulation protein YceD 0.94 MCAODC_20460 wzzB LPS O-antigen chain length determinant protein WzzB 0.49 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF3370 COG1399 protein, clustered with ribosomal protein L32p 0.68 GFF3905 regulator of length of O-antigen component of lipopolysaccharide chains low > 78
Enterobacter asburiae PDN3 0.94 EX28DRAFT_1841 Predicted metal-binding, possibly nucleic acid-binding protein 0.63 EX28DRAFT_0532 Chain length determinant protein low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD 0.65 MPMX20_03009 Chain length determinant protein low > 85
Pseudomonas sp. RS175 0.22 PFR28_03014 Large ribosomal RNA subunit accumulation protein YceD 0.09 PFR28_00915 Chain length determinant protein — —

Not shown: 36 genomes with orthologs for ECD_01084 only; 0 genomes with orthologs for ECD_01929 only