Conservation of cofitness between ECD_01739 and ECD_01245 in Escherichia coli BL21

13 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01739 putative DNA-binding transcriptional regulator 1.0 ECD_01245 23S rRNA pseudouridine(2605) synthase 0.68 2
Escherichia fergusonii Becca 1.00 EFB2_02224 putative HTH-type transcriptional regulator YdjF 1.00 EFB2_02658 Ribosomal large subunit pseudouridine synthase B low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01962 putative HTH-type transcriptional regulator YdjF 1.00 OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS09875 DeoR/GlpR family DNA-binding transcription regulator 1.00 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli ECRC99 1.00 KEDOAH_01335 ydjF Uncharacterized HTH-type transcriptional regulator YdjF 0.99 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli ECRC98 1.00 JDDGAC_01350 ydjF Uncharacterized HTH-type transcriptional regulator YdjF 0.99 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 86
Escherichia coli ECRC101 1.00 MCAODC_18635 ydjF Uncharacterized HTH-type transcriptional regulator YdjF 0.99 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 87
Escherichia coli ECRC102 1.00 NIAGMN_01290 ydjF Uncharacterized HTH-type transcriptional regulator YdjF 0.99 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli ECRC100 1.00 OKFHMN_26775 ydjF Uncharacterized HTH-type transcriptional regulator YdjF 0.99 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 80
Escherichia coli ECOR38 1.00 HEPCGN_05165 ydjF Uncharacterized HTH-type transcriptional regulator YdjF 1.00 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 87
Escherichia coli BW25113 0.99 b1770 ydjF predicted DNA-binding transcriptional regulator (NCBI) 1.00 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI) 0.20 56
Escherichia coli ECRC62 0.98 BNILDI_16090 ydjF Uncharacterized HTH-type transcriptional regulator YdjF 0.99 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 75
Escherichia coli ECOR27 0.98 NOLOHH_17305 ydjF Uncharacterized HTH-type transcriptional regulator YdjF 0.99 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 75
Klebsiella michiganensis M5al 0.90 BWI76_RS11565 DeoR family transcriptional regulator 0.91 BWI76_RS11880 23S rRNA pseudouridylate synthase B low > 92

Not shown: 0 genomes with orthologs for ECD_01739 only; 19 genomes with orthologs for ECD_01245 only