Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BW25113 | 1.0 | b4213 | cpdB | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (NCBI) | 1.0 | b2537 | hcaR | DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism (NCBI) | 0.22 | 20 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_10240 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.99 | HEPCGN_20725 | hcaR | DNA-binding transcriptional regulator HcaR | low | > 85 |
Escherichia coli ECRC62 | 1.00 | BNILDI_07215 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.99 | BNILDI_12055 | hcaR | DNA-binding transcriptional regulator HcaR | — | — |
Escherichia coli ECOR27 | 1.00 | NOLOHH_04305 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.99 | NOLOHH_13255 | hcaR | DNA-binding transcriptional regulator HcaR | — | — |
Escherichia coli ECRC101 | 0.99 | MCAODC_02560 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 1.00 | MCAODC_12115 | hcaR | DNA-binding transcriptional regulator HcaR | — | — |
Escherichia coli ECRC99 | 0.99 | KEDOAH_16110 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 1.00 | KEDOAH_06635 | hcaR | DNA-binding transcriptional regulator HcaR | — | — |
Escherichia coli ECRC102 | 0.99 | NIAGMN_09895 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 1.00 | NIAGMN_19355 | hcaR | DNA-binding transcriptional regulator HcaR | — | — |
Escherichia coli BL21 | 0.99 | ECD_04085 | | 2':3'-cyclic-nucleotide 2'-phosphodiesterase | 1.00 | ECD_02429 | | hca operon transcriptional regulator | low | > 60 |
Escherichia coli ECRC101 | 0.99 | OKFHMN_12045 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 1.00 | OKFHMN_21585 | hcaR | DNA-binding transcriptional regulator HcaR | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_03820 | | '2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase' transl_table=11 | 1.00 | OHPLBJKB_01172 | | Hca operon transcriptional activator HcaR | low | > 73 |
Escherichia coli ECRC98 | 0.99 | JDDGAC_15685 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 1.00 | JDDGAC_25260 | hcaR | DNA-binding transcriptional regulator HcaR | — | — |
Shewanella amazonensis SB2B | 0.55 | Sama_1563 | cpdB | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) | 0.18 | Sama_2928 | | LysR family transcriptional regulator (RefSeq) | low | > 62 |
Shewanella loihica PV-4 | 0.54 | Shew_2162 | cpdB | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) | 0.18 | Shew_0828 | | LysR family transcriptional regulator (RefSeq) | low | > 60 |
Ralstonia solanacearum PSI07 | 0.34 | RPSI07_RS08230 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.25 | RPSI07_RS16750 | | LysR family transcriptional regulator | 0.55 | 39 |
Variovorax sp. SCN45 | 0.32 | GFF5698 | | 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) / 3'-nucleotidase (EC 3.1.3.6) | 0.24 | GFF2971 | | Transcriptional regulator, LysR family | low | > 127 |
Not shown: 36 genomes with orthologs for b4213 only; 9 genomes with orthologs for b2537 only