Conservation of cofitness between b4213 and b2537 in Escherichia coli BW25113

14 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b4213 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (NCBI) 1.0 b2537 hcaR DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism (NCBI) 0.22 20
Escherichia coli ECOR38 1.00 HEPCGN_10240 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase 0.99 HEPCGN_20725 hcaR DNA-binding transcriptional regulator HcaR low > 85
Escherichia coli ECRC62 1.00 BNILDI_07215 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase 0.99 BNILDI_12055 hcaR DNA-binding transcriptional regulator HcaR
Escherichia coli ECOR27 1.00 NOLOHH_04305 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase 0.99 NOLOHH_13255 hcaR DNA-binding transcriptional regulator HcaR
Escherichia coli ECRC101 0.99 MCAODC_02560 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase 1.00 MCAODC_12115 hcaR DNA-binding transcriptional regulator HcaR
Escherichia coli ECRC99 0.99 KEDOAH_16110 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase 1.00 KEDOAH_06635 hcaR DNA-binding transcriptional regulator HcaR
Escherichia coli ECRC102 0.99 NIAGMN_09895 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase 1.00 NIAGMN_19355 hcaR DNA-binding transcriptional regulator HcaR
Escherichia coli BL21 0.99 ECD_04085 2':3'-cyclic-nucleotide 2'-phosphodiesterase 1.00 ECD_02429 hca operon transcriptional regulator low > 60
Escherichia coli ECRC101 0.99 OKFHMN_12045 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase 1.00 OKFHMN_21585 hcaR DNA-binding transcriptional regulator HcaR
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03820 '2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase' transl_table=11 1.00 OHPLBJKB_01172 Hca operon transcriptional activator HcaR low > 73
Escherichia coli ECRC98 0.99 JDDGAC_15685 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase 1.00 JDDGAC_25260 hcaR DNA-binding transcriptional regulator HcaR
Shewanella amazonensis SB2B 0.55 Sama_1563 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) 0.18 Sama_2928 LysR family transcriptional regulator (RefSeq) low > 62
Shewanella loihica PV-4 0.54 Shew_2162 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) 0.18 Shew_0828 LysR family transcriptional regulator (RefSeq) low > 60
Ralstonia solanacearum PSI07 0.34 RPSI07_RS08230 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase 0.25 RPSI07_RS16750 LysR family transcriptional regulator 0.55 39
Variovorax sp. SCN45 0.32 GFF5698 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) / 3'-nucleotidase (EC 3.1.3.6) 0.24 GFF2971 Transcriptional regulator, LysR family low > 127

Not shown: 36 genomes with orthologs for b4213 only; 9 genomes with orthologs for b2537 only