Experiment: m.b. L-Lysine 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2699 and Dshi_2700 are separated by 476 nucleotides Dshi_2700 and Dshi_2701 overlap by 1 nucleotides Dshi_2701 and Dshi_2702 overlap by 4 nucleotides
Dshi_2699: Dshi_2699 - ABC transporter related (RefSeq), at 2,859,820 to 2,860,515
_2699
Dshi_2700: Dshi_2700 - haloacid dehalogenase, type II (RefSeq), at 2,860,992 to 2,861,681
_2700
Dshi_2701: Dshi_2701 - alpha/beta hydrolase fold (RefSeq), at 2,861,681 to 2,862,505
_2701
Dshi_2702: Dshi_2702 - Pyridoxal-5'-phosphate-dependent protein beta subunit (RefSeq), at 2,862,502 to 2,863,494
_2702
Position (kb)
2860
2861
2862 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2860.162 kb on + strand, within Dshi_2699 at 2860.311 kb on - strand, within Dshi_2699 at 2860.406 kb on + strand, within Dshi_2699 at 2860.489 kb on - strand at 2860.570 kb on + strand at 2860.678 kb on + strand at 2860.835 kb on + strand at 2860.901 kb on - strand at 2860.934 kb on + strand at 2860.990 kb on - strand at 2861.275 kb on + strand, within Dshi_2700 at 2861.290 kb on - strand, within Dshi_2700 at 2861.293 kb on + strand, within Dshi_2700 at 2861.362 kb on - strand, within Dshi_2700 at 2861.422 kb on - strand, within Dshi_2700 at 2861.469 kb on + strand, within Dshi_2700 at 2861.590 kb on + strand, within Dshi_2700 at 2861.814 kb on + strand, within Dshi_2701 at 2861.836 kb on + strand, within Dshi_2701 at 2861.883 kb on - strand, within Dshi_2701 at 2861.883 kb on - strand, within Dshi_2701 at 2861.958 kb on - strand, within Dshi_2701 at 2862.052 kb on + strand, within Dshi_2701 at 2862.053 kb on - strand, within Dshi_2701 at 2862.121 kb on + strand, within Dshi_2701 at 2862.265 kb on + strand, within Dshi_2701 at 2862.289 kb on + strand, within Dshi_2701 at 2862.576 kb on + strand at 2862.580 kb on - strand at 2862.632 kb on - strand, within Dshi_2702
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. L-Lysine 200 mM remove 2,860,162 + Dshi_2699 0.49 +0.7 2,860,311 - Dshi_2699 0.71 -1.2 2,860,406 + Dshi_2699 0.84 -2.2 2,860,489 - -1.1 2,860,570 + +0.7 2,860,678 + -0.2 2,860,835 + -0.9 2,860,901 - -0.3 2,860,934 + -1.0 2,860,990 - -0.6 2,861,275 + Dshi_2700 0.41 +0.7 2,861,290 - Dshi_2700 0.43 -0.2 2,861,293 + Dshi_2700 0.44 +1.4 2,861,362 - Dshi_2700 0.54 +0.4 2,861,422 - Dshi_2700 0.62 +0.3 2,861,469 + Dshi_2700 0.69 -0.6 2,861,590 + Dshi_2700 0.87 -0.4 2,861,814 + Dshi_2701 0.16 -0.6 2,861,836 + Dshi_2701 0.19 +2.0 2,861,883 - Dshi_2701 0.24 -0.0 2,861,883 - Dshi_2701 0.24 -0.8 2,861,958 - Dshi_2701 0.34 -0.2 2,862,052 + Dshi_2701 0.45 -1.1 2,862,053 - Dshi_2701 0.45 +1.4 2,862,121 + Dshi_2701 0.53 +2.6 2,862,265 + Dshi_2701 0.71 -0.1 2,862,289 + Dshi_2701 0.74 -1.7 2,862,576 + -1.0 2,862,580 - +0.2 2,862,632 - Dshi_2702 0.13 -0.5
Or see this region's nucleotide sequence